Return to main results Retrieve Phyre Job Id

Job DescriptionP32131
Confidence91.42%DateThu Jan 5 11:49:16 GMT 2012
Rank56Aligned Residues73
% Identity16%Templatec3kp3B_
PDB info PDB header:transcription regulator/antibioticChain: B: PDB Molecule:transcriptional regulator tcar; PDBTitle: staphylococcus epidermidis in complex with ampicillin
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   369370.........380.........390.........400.........410.........420.........430.........440......
Predicted Secondary structure 













Query SS confidence 













































































Query Sequence  IRRDVIKSLICNFRLDYAPIEKQWDLHFADYFAEDLKLLAPLAKDGLVDVDEKGIQVTAKGRLLIRNICMCFDTYLRQ
Query Conservation          
     

        
             
  
   


        

  
      
   

  
  
Alig confidence 



























....















.




























Template Conservation    
  

        
  


    
  ....  

  
  
   
 
. 
   
 

 

                 
Template Sequence  AEQSHVLNMLSIEALTVGQITEKQGVNK. . . . AAVSRRVKKLLNAELV. KLEKIIKLSNKGKKYIKERKAIMSHIASD
Template Known Secondary structure  TSS

B
TS
....TTTS.



B
Template Predicted Secondary structure 






....




.



Template SS confidence 













































































   38.40.........50.........60..... ....70.........80. ........90.........100.........110
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions