Return to main results Retrieve Phyre Job Id

Job DescriptionP32131
Confidence33.37%DateThu Jan 5 11:49:16 GMT 2012
Rank424Aligned Residues98
% Identity11%Templatec3dz1A_
PDB info PDB header:lyaseChain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 1.87a resolution
Resolution1.87 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   153......160.........170.........180.........190.........200.........210.........220.........230..
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  LDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL
Query Conservation   
 
  
   

 







    

  
 
          
   
  
   
  


 





      

     
Alig confidence 


























.......

















...
























Template Conservation     
  
   

 

 
 




   
.......
  

  
          ...  

 

   
   

  
  
   
Template Sequence  DRLTDFYAEVGCEGVTVLGILGEAPKL. . . . . . . DAAEAEAVATRFIKRAKS. . . XQVIVGVSAPGFAAXRRLARLSXDA
Template Known Secondary structure  TT
SSTGGGTGGGS.......

TT...S


SS
Template Predicted Secondary structure 










.......



...





Template SS confidence 















































































   30.........40.........50...... ...60.........70.... .....80.........90.........
 
   233......240.........250.........260.........270.....
Predicted Secondary structure 















Query SS confidence 










































Query Sequence  NPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIA
Query Conservation   

 

 
 
   
             

           
  
Alig confidence 










...............
















Template Conservation 


 
 
 

 ...............           
  
  
Template Sequence  GAAGVXIAPPP. . . . . . . . . . . . . . . SLRTDEQITTYFRQATE
Template Known Secondary structure  T
S


T...............T

S
Template Predicted Secondary structure 






...............



Template SS confidence 










































   100.........110 .........120.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions