Job Description P32131 Confidence 99.43% Date Thu Jan 5 11:49:16 GMT 2012 Rank 10 Aligned Residues 200 % Identity 16% Template c2yx0A_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:radical sam enzyme; PDBTitle: crystal structure of p. horikoshii tyw1 Resolution 2.21 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		59	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.															.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.
Predicted Secondary structure													.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence													.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		I	P	F	C	H	K	L	C	Y	F	C	.	.	G	C	N	K	I	V	T	R	Q	Q	H	K	A	D	Q	Y	L	D	A	L	E	Q	E	I	V	H	R	A	P	L	F	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	H	V	S	Q	L	H	W	G	G	.	G	T	P	T	Y	L	N	K	A
Query Conservation													.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence													.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.											.								.	.
Template Conservation																																																																																.	.
Template Sequence		L	A	W	C	T	H	N	C	I	F	C	W	R	P	M	E	N	F	L	G	T	E	L	P	Q	P	W	D	D	P	A	F	I	V	E	E	S	I	K	A	Q	R	K	L	L	I	G	Y	K	P	K	V	D	K	K	K	F	E	E	A	W	N	P	T	H	A	A	I	S	L	S	G	E	P	M	L	Y	P	.	.
Template Known Secondary structure		S	S			S	B			T	T				S	S	S	S		S		S	S			S	S																				T	T					S									T	S								S	S	S		G	G	G	S	T	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.
Query SS confidence																																																																	.	.	.
Query Sequence		Q	I	S	R	L	M	K	L	L	R	E	N	F	Q	F	N	A	D	A	E	I	S	I	E	V	D	P	R	E	I	E	L	D	V	L	D	H	L	R	A	E	G	F	N	R	L	S	M	G	V	Q	D	F	N	K	E	V	Q	R	L	V	N	R	.	.	.	E	Q	D	E	E	F	I	F	A	L	L	N	H	A
Query Conservation																																																																	.	.	.
Alig confidence														.	.	.	.	.																																															.	.	.
Template Conservation														.	.	.	.	.
Template Sequence		Y	M	G	D	L	V	E	E	F	H	K	R	.	.	.	.	.	G	F	T	T	F	I	V	T	N	G	T	I	P	E	R	L	E	E	M	I	K	E	D	K	L	P	T	Q	L	Y	V	S	I	T	A	P	D	I	E	T	Y	N	S	V	N	I	P	M	I	P	D	G	W	E	R	I	L	R	F	L	E	L	M
Template Known Secondary structure		T											T	.	.	.	.	.	T									S												T	T				S									S	S										B	S	S	S
Template Predicted Secondary structure														.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.						170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		199	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		R	E	I	G	F	T	.	S	T	N	I	D	L	I	Y	G	L	P	K	Q	T	P	E	S	F	A	F	T	L	K	R	V	A	E	L	N	P	D	R	L	S	V	F	N	Y	A	H	L	P	T	I	F	A	A	Q	R	K	I	K	D	A	D	L	P	S	P	Q	Q	K	L	D	I	L	Q	E	T	I	A	F	L
Query Conservation								.
Alig confidence								.																										.	.	.													.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.													.	.	.	.	.	.	.	.	.
Template Sequence		R	D	L	P	T	R	T	V	V	R	L	T	L	V	K	G	E	N	M	H	S	P	E	K	Y	A	K	L	I	L	K	A	.	.	.	R	P	M	F	V	E	A	K	A	Y	M	N	.	.	.	.	.	.	.	.	.	R	L	T	I	N	N	M	P	S	H	Q	D	I	R	E	F	A	E	A	L	V	K	H	L
Template Known Secondary structure		T	T		S	S										T	T	T	T															.	.	.			S										.	.	.	.	.	.	.	.	.				G	G	G	S															T	T
Template Predicted Secondary structure																																		.	.	.													.	.	.	.	.	.	.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.				.	.	.	.	.	270	.	.	.	.	.	.										.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions