Return to main results Retrieve Phyre Job Id

Job DescriptionP32131
Confidence89.12%DateThu Jan 5 11:49:16 GMT 2012
Rank73Aligned Residues38
% Identity21%Templatec2xznT_
PDB info PDB header:ribosomeChain: T: PDB Molecule:rps19e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2
Resolution3.93 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   403......410.........420. ........430.........440
Predicted Secondary structure 




......
Query SS confidence 


















. . . . . .


















Query Sequence  DLKLLAPLAKDGLVDVDEK. . . . . . GIQVTAKGRLLIRNICMCF
Query Conservation      
  
   


     ......   

  
      
   
Alig confidence 


















......


















Template Conservation 

  




  
 


         

 

  
   

 

  
Template Sequence  LRWALKSLEDLKIIRKDKNSATKKFSRVITKEGMTELNRIATQI
Template Known Secondary structure  TTS
SS
SSSTT

Template Predicted Secondary structure 













Template SS confidence 











































   104.....110.........120.........130.........140.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions