Return to main results Retrieve Phyre Job Id

Job DescriptionP32131
Confidence79.57%DateThu Jan 5 11:49:16 GMT 2012
Rank136Aligned Residues156
% Identity14%Templatec2nx9B_
PDB info PDB header:lyaseChain: B: PDB Molecule:oxaloacetate decarboxylase 2, subunit alpha; PDBTitle: crystal structure of the carboxyltransferase domain of the2 oxaloacetate decarboxylase na+ pump from vibrio cholerae
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   90.........100.........110.... .....120.........130.........140...... ...150....
Predicted Secondary structure 









.....










..........





Query SS confidence 
























. . . . .































. . . . . . . . . .







Query Sequence  EQEIVHRAPLFAGRHVSQLHWGGGT. . . . . PTYLNKAQISRLMKLLRENFQFNADAEISIEV. . . . . . . . . . DPREIELD
Query Conservation    

           
  
  



.....

 
    
  
   
          
 
 
 .......... 
  
  
Alig confidence 
























.....


















....








..........







Template Conservation 
  
  

  
  


  



  
          

  
 
       ....
   
  
 

            
   
Template Sequence  IDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQAM. . . . PNTPLQMLLRGQNLLGYRHYADDVVDT
Template Known Secondary structure  TTTTS

STTT



....TTS

GGGTTSSS


Template Predicted Secondary structure 













....











Template SS confidence 















































































   2930.........40.........50.........60.........70....... ..80.........90.........100....
 
   155....160.........170.........180.........190.........200.........210.........220.........230....
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  VLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAELNP
Query Conservation   
  
   

 







    

  
 
          
   
  
   
  


 





      

     
 
Alig confidence 















............



















































Template Conservation   
  
   

   

 ............  
         
  

  
  
   
          
     
  
   

Template Sequence  FVERAVKNGMDVFRVF. . . . . . . . . . . . DAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGV
Template Known Secondary structure  T


............
TT

T




TT

TT
Template Predicted Secondary structure 




............














Template SS confidence 















































































   105....110.........120 .........130.........140.........150.........160.........170..
 
   235....240.........250.........260.........270......
Predicted Secondary structure 













Query SS confidence 









































Query Sequence  DRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAF
Query Conservation 
 

 
 
   
             

           
   
Alig confidence 




...............





















Template Conservation 
 
 
............... 

 
   
  
  

  

  
Template Sequence  DSIAL. . . . . . . . . . . . . . . KDMAGILTPYAAEELVSTLKKQ
Template Known Secondary structure  S...............SSS


Template Predicted Secondary structure 
...............







Template SS confidence 









































   173.... ..180.........190.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions