Return to main results Retrieve Phyre Job Id

Job DescriptionP32131
Confidence85.47%DateThu Jan 5 11:49:16 GMT 2012
Rank96Aligned Residues85
% Identity18%Templatec2dh3A_
PDB info PDB header:transport protein, signaling proteinChain: A: PDB Molecule:4f2 cell-surface antigen heavy chain; PDBTitle: crystal structure of human ed-4f2hc
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   154.....160.........170. ........180...... ...190.........200.........210.........
Predicted Secondary structure 






......







.










.......
Query SS confidence 

















. . . . . .














.
































. . . . . . .
Query Sequence  DVLDHLRAEGFNRLSMGV. . . . . . QDFNKEVQRLVNREQ. DEEFIFALLNHAREIGFTSTNIDLIYGLPKQTP. . . . . . .
Query Conservation 
 
  
   

 





......

    

  
 
  .        
   
  
   
  


 





 .......
Alig confidence 

















......














.

















.













.......
Template Conservation   





 


  
 
 

       
   
   

   

  


 

   
  

 .



 
 

     

     
Template Sequence  GRLDYLSSLKVKGLVLGPIHKNQKDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSIR. VILDLTPNYRGENSWFSTQVD
Template Known Secondary structure  GGTTT



TT
STT
TTT

TT
.

TTTTSSSTTSSS

T
Template Predicted Secondary structure 































.













Template SS confidence 















































































   145....150.........160.........170.........180.........190.........200.. .......210.........220...
 
   220.........230.........
Predicted Secondary structure  ...



Query SS confidence  . . .



















Query Sequence  . . . ESFAFTLKRVAELNPDRLSV
Query Conservation  ...     

     
 

 

 
Alig confidence  ...



















Template Conservation   
   
      
 
 





 
Template Sequence  TVATKVKDALEFWLQAGVDGFQV
Template Known Secondary structure  TT

Template Predicted Secondary structure 



Template SS confidence 






















   224.....230.........240......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions