Job Description P32131 Confidence 48.63% Date Thu Jan 5 11:49:16 GMT 2012 Rank 321 Aligned Residues 79 % Identity 28% Template c1uokA_ PDB info PDB header:glucosidase Chain: A: PDB Molecule:oligo-1,6-glucosidase; PDBTitle: crystal structure of b. cereus oligo-1,6-glucosidase Resolution 2.00 Å

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		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.														.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																				.	.																.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.
Query SS confidence																				.	.																.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.
Query Sequence		D	V	L	D	H	L	R	A	E	G	F	N	R	L	S	M	G	V	.	.	Q	D	F	N	K	E	V	Q	R	L	V	N	R	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	E	F	I	F	A	L	L	N	H	A	R	E	I	G	F	T	S	T	N	I	D	L	I	Y	G	L	P	K	.	.
Query Conservation																				.	.																.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.
Alig confidence																				.	.						.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.																			.												.	.
Template Conservation																											.	.	.	.	.	.																																				.
Template Sequence		S	K	L	D	Y	L	K	E	L	G	I	D	V	I	W	L	S	P	V	Y	E	S	P	N	D	.	.	.	.	.	.	D	N	G	Y	D	I	S	D	Y	C	K	I	M	N	E	F	G	T	M	E	D	W	D	E	L	L	H	E	M	H	E	R	N	M	K	.	L	M	M	D	L	V	V	N	H	T	S	D	E
Template Known Secondary structure		T	T								T															T	.	.	.	.	.	.	T	T	T	S	S		S							G	G	G																T	T			.								S	B			T	T
Template Predicted Secondary structure																											.	.	.	.	.	.																																				.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.							60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.
																																																																						217	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	T	P	E	S	F	A	F	T	L	K	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	N	W	F	I	E	S	R	K	S	K	D	N	K	Y	R	D	Y	Y	I	W	R	P	G	K	E	G	K	E	P	N	N	W	G	A	A	F	S	G	S	A	W	Q	Y	D	E	M	T	D	E	Y	Y	L	H	L	F	S	K	K	Q	P	D	L	N	W	D	N	E	K	V	R	Q	D	V	Y	E	M	M	K	F
Template Known Secondary structure		S							T	T		T	T		T	T	G	G	G	B						S	S	S	S		S	S		B	B		T	T	S	S	B	S					T	T	T	T						S	S		T	T	S		B	B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	E	L	N	P	D	R	L	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	L	E	K	G	I	D	G	F	R	M
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions