Return to main results Retrieve Phyre Job Id

Job DescriptionP32131
Confidence94.16%DateThu Jan 5 11:49:16 GMT 2012
Rank30Aligned Residues158
% Identity15%Templatec1nvmG_
PDB info PDB header:lyase/oxidoreductaseChain: G: PDB Molecule:4-hydroxy-2-oxovalerate aldolase; PDBTitle: crystal structure of a bifunctional aldolase-dehydrogenase :2 sequestering a reactive and volatile intermediate
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   90.........100.........110. ........120.........130.........140.........150.........160....
Predicted Secondary structure 






.....






















Query SS confidence 





















. . . . .




















































Query Sequence  EQEIVHRAPLFAGRHVSQLHWG. . . . . GGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGF
Query Conservation    

           
  
  
.....




 
    
  
   
          
 
 
  
  
  
 
  
   

Alig confidence 





















.....













.





































Template Conservation     
  
   
   

  



                  
. 
                           
  
   
 
Template Sequence  LDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTD. LEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAYQAGA
Template Known Secondary structure  TT
SS
TTSTT

BTTTB

SS
.TT
SSS
BTTB
T
Template Predicted Secondary structure 




















.











Template SS confidence 















































































   2930.........40.........50.........60......... 70.........80.........90.........100.......
 
   165....170.........180.........190.........200.........210.........220.........230.........240....
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  NRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYAH
Query Conservation   







    

  
 
          
   
  
   
  


 





      

     
 

 

 
 
  
Alig confidence 










............
















.








.























.....
Template Conservation    
 
      ............       
  

  
  .
        .                 


 
 
.....
Template Sequence  RVVRVATHCTE. . . . . . . . . . . . ADVSKQHIEYARNLGMD. TVGFLMMSH. MIPAEKLAEQGKLMESYGATCIYM. . . . .
Template Known Secondary structure 
TT
............GGGGTT
.TGG.GS
T
S.....
Template Predicted Secondary structure 
............


.



.






.....
Template SS confidence 















































































   108.110........ .120.........130..... ....140.... .....150.........160........
 
   245....250.........260.........270.......
Predicted Secondary structure 










Query SS confidence 
































Query Sequence  LPTIFAAQRKIKDADLPSPQQKLDILQETIAFL
Query Conservation   
             

           
   
Alig confidence  ..........






















Template Conservation  .......... 

 
   
     

  
    
Template Sequence  . . . . . . . . . . ADSGGAMSMNDIRDRMRAFKAVL
Template Known Secondary structure  ..........
TTS


S
Template Predicted Secondary structure  ..........








Template SS confidence 
































   169170.........180.........190.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions