Job Description P36667 Confidence 100.00% Date Thu Jan 5 11:53:36 GMT 2012 Rank 1 Aligned Residues 253 % Identity 9% Template d1xhba2 SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain Resolution 2.50

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		1	.	.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure														.																.			.	.
Query SS confidence														.																.			.	.
Query Sequence		M	V	Y	I	I	I	V	S	H	G	H	E	.	D	Y	I	K	K	L	L	E	N	L	N	A	D	D	E	.	H	Y	.	.	K	I	I	V	R	D	N	K	D	S	L	L	L	K	Q	I	C	Q	H	Y	A	G	L	D	Y	I	S	G	G	V	Y	G	F	G	H	N	N	N	I	A	V	A	Y	V	K	E	K
Query Conservation														.																.			.	.
Alig confidence														.																.			.	.
Template Conservation
Template Sequence		T	T	S	V	V	I	V	F	H	N	E	A	W	S	T	L	L	R	T	V	H	S	V	I	N	R	S	P	R	H	M	I	E	E	I	V	L	V	D	D	A	S	E	R	D	F	L	K	R	P	L	E	S	Y	V	K	K	L	K	V	P	V	H	V	I	R	M	E	Q	R	S	G	L	I	R	A	R	L	K	G
Template Known Secondary structure										S	S																S	S		G	G	G										S				G	G	G	T									S	S	S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.					.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																															.	.	.	.
Query SS confidence																																																															.	.	.	.
Query Sequence		Y	R	P	A	D	D	D	Y	I	L	F	L	N	P	D	I	I	M	K	H	D	D	L	L	T	Y	I	K	Y	V	E	S	K	R	Y	A	F	S	T	L	C	L	F	R	D	E	A	K	S	L	H	D	Y	S	V	R	K	F	P	V	L	.	.	.	.	S	D	F	I	V	S	F	M	L	G	I	N	K	T	K
Query Conservation																																																															.	.	.	.
Alig confidence																																																															.	.	.	.
Template Conservation
Template Sequence		A	A	V	S	R	G	Q	V	I	T	F	L	D	A	H	C	E	C	T	A	G	W	L	E	P	L	L	A	R	I	K	H	D	R	R	T	V	V	C	P	I	I	D	V	I	S	D	D	T	F	E	Y	M	A	G	S	D	M	T	Y	G	G	F	N	W	K	L	N	F	R	W	Y	P	V	P	Q	R	E	M	D
Template Known Secondary structure							S	S							S	S					T	T													T	T												S	S	S								T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		I	P	K	E	S	I	Y	S	D	T	V	V	D	W	C	A	G	S	F	M	L	V	R	F	S	D	F	V	R	V	N	G	F	D	Q	G	Y	F	M	Y	C	.	E	D	I	D	L	C	L	R	L	S	L	A	G	V	R	L	H	Y	V	P	A	F	H	A	I	H	Y	A	H	H	D	N	R	S	F	F	S	K
Query Conservation																																											.
Alig confidence																																											.
Template Conservation
Template Sequence		R	R	K	G	D	R	T	L	P	V	R	T	P	T	M	A	G	G	L	F	S	I	D	R	D	Y	F	Q	E	I	G	T	Y	D	A	G	M	D	I	W	G	G	E	N	L	E	I	S	F	R	I	W	Q	C	G	G	T	L	E	I	V	T	C	S	H	V	G	H	V	F	G	Q	I	I	N	K	N	N	R	R
Template Known Secondary structure			T	T	T		T	T	S					S	B			S	S	S											T	T	S			T	T	S		T	T					S									T	T
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	R	W	H	L	K	S	T	F	R	Y	L	A	R	K	R	I	L	S	N	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	E	V	W	M	D	E	F	K	N	F	F	Y	I	I	S	P	G	V	T	K
Template Known Secondary structure								G	G	G	G						T	S	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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