Job Description P36667 Confidence 57.02% Date Thu Jan 5 11:53:36 GMT 2012 Rank 40 Aligned Residues 201 % Identity 12% Template d1vh1a_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.60

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		2	.	.	.	.	.	.													.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Y	I	I	I	V	S	.	.	.	.	.	.	.	.	.	.	.	.	H	G	H	E	D	Y	I	K	K	L	L	E	N	L	N	A	D	D	E	H	Y	K	I	I	V	R	D	N	K	D	S	L	L	L	K	Q	I	C	Q	H	Y	A	G	L	D	Y	I	S	G	G	V	Y	G	F	G	H	N	N	N	I	A
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.																	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.																	.	.	.	.	.	.	.
Template Sequence		F	V	V	I	I	P	A	R	Y	A	S	T	P	G	K	P	L	V	D	I	N	G	K	P	X	I	V	H	V	L	E	R	A	R	E	S	G	A	E	R	I	I	V	A	T	D	H	.	.	.	E	D	V	A	R	A	V	E	A	A	G	G	E	V	C	X	.	.	.	.	.	.	.	T	R	G	T	E	R	L
Template Known Secondary structure																T	T	T				T	T														T	T		S							S		.	.	.										T	T						.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.																	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.								.	.	.	.	70	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.
Query SS confidence																																																																			.	.	.
Query Sequence		V	A	Y	V	K	E	K	Y	R	P	A	D	D	D	Y	I	L	F	L	N	P	D	I	I	M	K	H	D	D	L	L	T	Y	I	K	Y	V	E	S	K	R	Y	A	F	S	T	L	C	L	F	R	D	E	A	K	S	L	H	D	Y	S	V	R	K	F	.	.	.	P	V	L	S	D	F	I	V	S	F	M	L
Query Conservation																																																																			.	.	.
Alig confidence																																																																			.	.	.
Template Conservation
Template Sequence		A	E	V	V	E	K	C	A	F	S	D	D	T	V	I	V	N	V	Q	G	D	E	P	X	I	P	A	T	I	I	R	Q	V	A	D	N	L	A	Q	R	Q	V	G	X	A	T	L	A	V	P	I	H	N	A	E	E	A	F	N	P	N	A	V	K	V	V	L	D	A	E	G	Y	A	L	Y	F	S	R	A	T
Template Known Secondary structure								T	T			T	T								T	T		T	T																S	S	S	S															T		T	T	S							T	T	S	B						S	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	N	K	T	K	I	P	K	E	S	I	Y	S	D	T	V	V	D	W	C	A	G	S	F	M	L	V	R	F	S	D	F	V	R	V	N	G	F	D	Q	G	Y	F	M	Y	C	E	D	I	D	L	C	L	R	L	S	L	A	G	V	R	L	H	Y	V	P
Query Conservation
Alig confidence																																																							.
Template Conservation																																																							.
Template Sequence		I	P	W	D	R	D	R	F	A	E	G	L	E	T	V	G	D	N	F	L	R	H	L	G	I	Y	G	Y	R	A	G	F	I	R	R	Y	V	N	W	Q	P	S	P	L	E	H	I	E	X	L	E	Q	L	.	R	V	L	W	Y	G	E	K	I	H	V	A	V
Template Known Secondary structure		S	S							S	S							S																						S										T		T	T		.					T	T
Template Predicted Secondary structure																																																							.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions