Job Description P36667 Confidence 66.70% Date Thu Jan 5 11:53:36 GMT 2012 Rank 35 Aligned Residues 189 % Identity 11% Template d1lvwa_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases glucose-1-phosphate thymidylyltransferase Resolution 1.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	S	H	G	H	E	D	Y	I	K	K	L	L	E	N	L	N	A	D	D	E	H	Y	K	I	I	V	R	D	N	K	D	S	L	L	L	K	Q	I	C	Q	H	Y	A	G	L	D	Y	I	S	G	G	V	Y	G	F	G	H	N	N	N	I	A	V	A	Y	V	K	E	K	Y	R	P	A	D	D	D	Y	I
Query Conservation
Alig confidence								.																	.
Template Conservation								.																	.
Template Sequence		L	P	I	Y	D	K	.	P	M	I	Y	Y	P	L	S	V	L	M	L	A	G	I	R	.	D	I	L	I	I	S	T	P	R	D	L	P	L	Y	R	D	L	L	G	D	G	S	Q	F	G	V	R	F	S	Y	R	V	Q	E	E	P	R	G	I	A	D	A	F	I	V	G	K	D	F	I	G	D	S	K	V	A
Template Known Secondary structure		S			T	T		.		T	T										T	T			.								T	T	T									T	T	S	G	G	G	T	S								S	S				G	G	G					T					T	T	S
Template Predicted Secondary structure								.																	.
Template SS confidence
		26	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	L	N	P	D	I	I	M	K	H	D	D	L	L	T	Y	I	K	Y	V	E	S	K	R	Y	A	F	S	T	L	C	L	F	R	D	E	A	K	S	L	H	D	Y	S	V	R	K	F	P	V	L	S	D	F	I	V	S	F	M	L	G	I	N	K	T	K	I	P	K	E	S	I	Y	S	D	T	V	V	D
Query Conservation
Alig confidence														.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	L	G	D	N	V	F	Y	G	H	R	.	F	S	E	I	L	R	R	A	A	S	L	E	D	G	A	V	I	F	G	Y	Y	V	R	D	P	R	P	F	G	V	V	E	F	D	S	E	G	R	V	I	S	I	E	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	R	P	K	S	N
Template Known Secondary structure					T	T						T	T	.										T			S	S									S			T	T	S							T	T	S	B							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S		S		S
Template Predicted Secondary structure														.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160																.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	C	A	G	S	F	M	L	V	R	F	S	D	F	V	R	V	N	G	F	D	Q	G	Y	F	M	Y	C	E	D	I	D	L	C	L	R	L	S	L	A	G	V	R	L	H	Y	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	V	V	P	G	L	Y	F	Y	D	N	Q	V	V	E	I	A	R	R	I	E	P	S	D	R	G	E	L	E	I	T	S	V	N	E	E	Y	L	R	M	G	K	L	R	V	E	L
Template Known Secondary structure						S						T	T												T	T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions