Job Description P36667 Confidence 90.17% Date Thu Jan 5 11:53:36 GMT 2012 Rank 22 Aligned Residues 197 % Identity 14% Template c3tqdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:3-deoxy-manno-octulosonate cytidylyltransferase; PDBTitle: structure of the 3-deoxy-d-manno-octulosonate cytidylyltransferase2 (kdsb) from coxiella burnetii Resolution 1.80 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	E	D	Y	I	K	K	L	L	E	N	L	N	A	D	D	E	H	Y	K	I	I	V	R	D	N	K	D	S	L	L	L	K	Q	I	C	Q	H	Y	A	G	L	D	Y	I	S	G	G	V	Y	G	F	G	H	N	N	N	I	A	V	A	Y	V	K	E	K	Y	R	P	A	D	D	D	Y	I	L	F	L	N
Query Conservation
Alig confidence																													.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.
Template Sequence		A	G	K	P	X	I	Q	H	V	Y	E	S	A	I	K	S	G	A	E	E	V	V	I	A	T	D	D	.	.	.	.	.	.	K	R	I	R	Q	V	A	E	D	F	G	A	V	V	C	X	T	S	S	D	H	Q	S	G	T	E	R	I	A	E	A	A	V	A	L	G	F	E	D	D	E	I	I	V	C	L	Q
Template Known Secondary structure		T	T														T	T		S							S		.	.	.	.	.	.										T	T								T	T			S												T	T			T	T
Template Predicted Secondary structure																													.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.							.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.				.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure							.																																																							.	.	.
Query SS confidence							.																																																							.	.	.
Query Sequence		P	D	I	I	M	.	K	H	D	D	L	L	T	Y	I	K	Y	V	E	S	K	R	Y	A	F	S	T	L	C	L	F	R	D	E	A	K	S	L	H	D	Y	S	V	R	K	F	P	V	L	S	D	F	I	V	S	F	M	L	G	I	.	.	.	N	K	T	K	I	P	K	E	S	I	Y	S	D	T	V	V	D
Query Conservation							.																																																							.	.	.
Alig confidence							.																																																							.	.	.
Template Conservation
Template Sequence		G	D	E	P	L	I	P	P	D	A	I	R	K	L	A	E	D	L	D	E	H	D	K	V	A	S	L	C	T	P	I	T	E	V	D	E	L	F	N	P	H	S	T	K	V	V	L	N	R	R	N	Y	A	L	Y	F	S	H	A	P	I	P	W	G	R	D	T	F	S	D	K	E	N	L	Q	L	N	G	S	H
Template Known Secondary structure		T	T																																				T		T	T	S							T	T	S	B						S	S		S	S			T	T	T	T	T		G	G	G				S	S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	C	A	G	S	F	M	L	V	R	F	S	D	F	V	R	V	N	G	F	D	Q	G	Y	F	M	Y	C	E	D	I	D	L	C	L	R	L	S	L	A	G	V	R	L	H	Y	V	P
Query Conservation
Alig confidence																																				.
Template Conservation																																				.
Template Sequence		Y	R	H	V	G	I	Y	A	Y	R	V	G	F	L	E	E	Y	L	S	W	D	A	C	P	A	E	K	X	E	A	L	E	Q	L	.	R	I	L	W	H	G	G	R	I	H	X	V	V
Template Known Secondary structure																					S										T		T	T		.					T	T
Template Predicted Secondary structure																																				.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions