Job Description P36667 Confidence 100.00% Date Thu Jan 5 11:53:36 GMT 2012 Rank 2 Aligned Residues 256 % Identity 9% Template c2ffuA_ PDB info PDB header:transferase Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 2; PDBTitle: crystal structure of human ppgalnact-2 complexed with udp2 and ea2 Resolution 1.64 Å

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		1	.	.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.				30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure														.																		.	.	.
Query SS confidence														.																		.	.	.
Query Sequence		M	V	Y	I	I	I	V	S	H	G	H	E	.	D	Y	I	K	K	L	L	E	N	L	N	A	D	D	E	H	Y	.	.	.	K	I	I	V	R	D	N	K	D	S	L	L	L	K	Q	I	C	Q	H	Y	A	G	L	D	Y	I	S	G	G	V	Y	G	F	G	H	N	N	N	I	A	V	A	Y	V	K	E	K
Query Conservation														.																		.	.	.
Alig confidence														.																		.	.	.																								.	.	.	.	.
Template Conservation																																																										.	.	.	.	.
Template Sequence		A	T	S	V	V	I	T	F	H	N	E	A	R	S	A	L	L	R	T	V	V	S	V	L	K	K	S	P	P	H	L	I	K	E	I	I	L	V	D	D	Y	S	N	D	P	E	D	G	A	L	L	G	K	I	E	K	.	.	.	.	.	V	R	V	L	R	N	D	R	R	E	G	L	M	R	S	R	V	R	G
Template Known Secondary structure										S	S																	S		G	G	G										S		S		T					G	G	G	G	B	T	T	.	.	.	.	.							S	S
Template Predicted Secondary structure																																																										.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.						.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.					.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																			.	.	.	.
Query SS confidence																																																			.	.	.	.
Query Sequence		Y	R	P	A	D	D	D	Y	I	L	F	L	N	P	D	I	I	M	K	H	D	D	L	L	T	Y	I	K	Y	V	E	S	K	R	Y	A	F	S	T	L	C	L	F	R	D	E	A	K	S	.	.	.	.	L	H	D	Y	S	V	R	K	F	P	V	L	S	D	F	I	V	S	F	M	L	G	I	N	K	T	K
Query Conservation																																																			.	.	.	.
Alig confidence																																																			.	.	.	.
Template Conservation
Template Sequence		A	D	A	A	Q	A	K	V	L	T	F	L	D	S	H	C	E	C	N	E	H	W	L	E	P	L	L	E	R	V	A	E	D	R	T	R	V	V	S	P	I	I	D	V	I	N	M	D	N	F	Q	Y	V	G	A	S	A	D	L	K	G	G	F	D	W	N	L	V	F	K	W	D	Y	M	T	P	E	Q	R	R
Template Known Secondary structure							S	S							S	S					T	T													T	T												T	T	T								S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.						220	.	.	.	.	.	.
Predicted Secondary structure																																										.																												.	.	.	.	.
Query SS confidence																																										.																												.	.	.	.	.
Query Sequence		I	P	K	E	S	I	Y	S	D	T	V	V	D	W	C	A	G	S	F	M	L	V	R	F	S	D	F	V	R	V	N	G	F	D	Q	G	Y	F	M	Y	.	C	E	D	I	D	L	C	L	R	L	S	L	A	G	V	R	L	H	Y	V	P	A	F	H	A	I	H	.	.	.	.	.	Y	A	H	H	D	N	R
Query Conservation																																										.																												.	.	.	.	.
Alig confidence																																										.																												.	.	.	.	.
Template Conservation
Template Sequence		S	R	Q	G	N	P	V	A	P	I	K	T	P	M	I	A	G	G	L	F	V	M	D	K	F	Y	F	E	E	L	G	K	Y	D	M	M	M	D	V	W	G	G	E	N	L	E	I	S	F	R	V	W	Q	C	G	G	S	L	E	I	I	P	C	S	R	V	G	H	V	F	R	K	Q	H	P	Y	T	F	P	G
Template Known Secondary structure			T	S	S		T	T	S					S	S			S	S	S											T	T				T	T			S	S	S	S												T	T																	S	S			S			T	T
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	F	S	K	A	F	R	W	H	L	K	S	T	F	R	Y	L	A	R	K	R	I	L	S	N	R	N	F	D	R	I	S	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	G	T	V	F	A	R	N	T	R	R	A	A	E	V	W	M	D	E	Y	K	N	F	Y	Y	A	A	V	P	S	A	R	N	V
Template Known Secondary structure																				G	G	G									G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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