Return to main results Retrieve Phyre Job Id

Job DescriptionP0CE59
Confidence79.72%DateThu Jan 5 11:30:29 GMT 2012
Rank4Aligned Residues115
% Identity14%Templatec3hefB_
PDB info PDB header:viral proteinChain: B: PDB Molecule:gene 1 protein; PDBTitle: crystal structure of the bacteriophage sf6 terminase small2 subunit
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   87..90.........100.........110.........120...... ...130.........140.........150.........160.....
Predicted Secondary structure 











.















Query SS confidence 







































.






































Query Sequence  GAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQ. HQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSST
Query Conservation 
 
          
 
 
       

 


 


 

  .      

  
   
   

       



 
 
    
Alig confidence 

















...


















.

































.....
Template Conservation 
 
   

 
 

  

 ...  



  
   
      
 
    

    
    

  


    
   
 .....
Template Sequence  DDICSLLSSGESLLKVCK. . . RPGMPDKSTVFRWLAKHEDFRDKYAKATEARADSIFEEIFEIADNAIPDAAEVA. . . . .
Template Known Secondary structure  TT

TT...STT



T

SS.....
Template Predicted Secondary structure 

...












.....
Template SS confidence 















































































   1920.........30...... ...40.........50.........60.........70.........80.........90
 
   166...170....... ..180.. .......190.........200.........210..
Predicted Secondary structure 







.


.














Query SS confidence 











.




.





























Query Sequence  KNKEQQRDPEMH. QTKKG. NQWHFGMKAHIGVDAKSGLTHSLVTTAANE
Query Conservation         




.  

 .     


 
  

    

    

 

 
Alig confidence  ...








.




.





























Template Conservation  ...     
 

 
 
 
  
 




   
  
  
  


       
Template Sequence  . . . KARLRVDTRKWALARMNPRKYGDKVTNELVGKDGGAIQIETSPMST
Template Known Secondary structure  ...
S








GGGS








SS
Template Predicted Secondary structure  ...














Template SS confidence 
















































   91........100.........110.........120.........130......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions