Return to main results Retrieve Phyre Job Id

Job DescriptionP0CE59
Confidence22.42%DateThu Jan 5 11:30:29 GMT 2012
Rank12Aligned Residues45
% Identity16%Templatec2ky4A_
PDB info PDB header:photosynthesisChain: A: PDB Molecule:phycobilisome linker polypeptide; PDBTitle: solution nmr structure of the pbs linker domain of phycobilisome2 linker polypeptide from anabaena sp. northeast structural genomics3 consortium target nsr123e
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70.........80.........90.........100.........110..
Predicted Secondary structure 



















Query SS confidence 

















































Query Sequence  GRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALP
Query Conservation 


      
     
     



 
          
 
 
       
Alig confidence 





















..

















...




Template Conservation 

 
    

     
    
 .. 
 






 

   

...




Template Sequence  GRAPIDQAEIRKYNQILATQGI. . RAFINALVNSQEYNEVFG. . . EDTVP
Template Known Secondary structure  SS


ST
..SSS
...SSB

Template Predicted Secondary structure 








..


...




Template SS confidence 

















































   91........100.........110.. .......120.........130 .....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions