 |
Job Description | P0CE59 | Confidence | 5.68% | Date | Thu Jan 5 11:30:29 GMT 2012 |
Rank | 39 | Aligned Residues | 88 |
% Identity | 9% | Template | c1yvlB_ |
PDB info |
PDB header:signaling protein | Chain: B: PDB Molecule:signal transducer and activator of transcription |
PDBTitle: structure of unphosphorylated stat1
|
Resolution | 3.00 Å |
|
 |
  |   |
44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | P | W | Q | N | M | V | E | V | I | E | P | F | Y | P | K | A | G | N | G | R | R | P | Y | P | L | E | T | M | L | R | I | H | C | M | Q | H | W | Y | N | L | S | D | G | A | M | E | D | A | L | Y | E | I | A | S | M | R | L | F | A | R | L | S | L | D | S | A | L | P | D | R | T | T | I | M | N | F | R | H | L |
Query Conservation |   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
| . |
Template Conservation |   |
  |   |
|   |   |   |   |   |   |
|   |   |   |   |   | . |   |   |   |   |   |   | . |
|   |   |   |   |   |   | . | . |   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   | . | . | . |   |
|
|   |
|   |   | . |
Template Sequence |   |
A | R | W | A | Q | L | S | E | V | L | S | W | Q | F | S | . |
S | V | T | K | R | G | . |
L | N | V | D | Q | L | N | . |
. |
M | L | G | E | K | L | L | G | P | N | A | S | P | . |
. |
. |
. |
. |
D | G | L | I | P | W | T | R | F | C | K | E | N | I | N | D | K | N | F | . |
. |
. |
P | F | W | L | W | I | E | . |
Template Known Secondary structure |   |
 |
|  |  |  |  |  |  |  |  |  |  |  |  | T | . | T | T | S | S |
|
| . |
|
|  |  |  |  |  | . | . |  |  |  |  |  |  | S |
| S | S |
|
| T | . | . | . | . | . | T |
|
|  |  |  |  |  |  |  | T | S |
|
| T | T | S | S | S | . | . | . |
|  |  |  |  |  |  | . |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|
| . |
|
|  |  |  |  |  | . | . |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
| . | . | . |
|  |  |  |  |  |  | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1493 | . | . | . | . | . | . | 1500 | . | . | . | . | . | . | . | |
. | . | 1510 | . | . | . | |
. | . | . | . | . | . | 1520 | |
|
. | . | . | . | . | . | . | . | . | 1530 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 1540 | . | . | . | . | . | . | . | . | . | 1550 | . | . | |
|
|
. | . | . | . | . | . | . | |
  |
  |   |
124 | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | E | Q | H | Q | L | A | R | Q | L | F | K | T | I | N | R | W | L | A | E | A | G | V | M | M |
Query Conservation |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |
|
|   |   |
Alig confidence |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
Template Sequence |   |
. |
. |
. |
. |
S | I | L | E | L | I | K | K | H | L | L | P | L | W | N | D | G | C | I | M | G |
Template Known Secondary structure |   |
. | . | . | . |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  | T | T |
|
|
| B |
Template Predicted Secondary structure |   |
. | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
1560 | . | . | . | . | . | . | . | . | . | 1570 | . | . | . | . | . | . | . | . | . | 1580 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|