Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEM6
Confidence89.47%DateThu Jan 5 11:23:43 GMT 2012
Rank174Aligned Residues43
% Identity19%Templated2a61a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   189190.........200. ........210.........220.........230.
Predicted Secondary structure 

.






Query SS confidence 












.





























Query Sequence  LPEREKLVLTLYY. QEELNLKEIGAVLEVGESRVSQLHSQAIKR
Query Conservation 
   

 

 
  .  
 
  


  



   
     

  
Alig confidence 












.





























Template Conservation 

      
  
      
  


  
      

  
  
   
Template Sequence  ITPAQFDILQKIYFEGPKRPGELSVLLGVAKSTVTGLVKRLEAD
Template Known Secondary structure 



B
T

T
Template Predicted Secondary structure 










Template SS confidence 











































   32.......40.........50.........60.........70.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions