Job Description P0AEM6 Confidence 99.31% Date Thu Jan 5 11:23:43 GMT 2012 Rank 18 Aligned Residues 80 % Identity 19% Template d1or7b2 SCOP info Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors Resolution 2.00

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Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	Y	T	A	E	G	V	M	D	K	H	S	L	W	Q	R	Y	V	P	L	V	R	H	E	A	L	R	L	Q	V	R	L	P	A	S	V	E	L	D	D	L	L	Q	A	G	G	I	G	L	L	N	A	V	E	R	Y	D	A	L	Q	G	T	A	F	T	T	Y	A	V	Q	R	I	R	G	A	M	L	D	E
Query Conservation
Alig confidence																																	.	.	.	.																												.	.
Template Conservation																																	.	.	.	.																												.	.
Template Sequence		E	R	V	Q	K	G	D	Q	K	A	F	N	L	L	V	V	R	Y	Q	H	K	V	A	S	L	V	S	R	Y	V	P	.	.	.	.	S	G	D	V	P	D	V	V	Q	E	A	F	I	K	A	Y	R	A	L	D	S	F	R	G	D	S	A	.	.	F	Y	T	W	L	Y	R	I	A	V	N	T	A	K	N	Y
Template Known Secondary structure						T	T																						T	T	S		.	.	.	.	G	G	G																G	G	G			S	S	S		.	.
Template Predicted Secondary structure																																	.	.	.	.																												.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		83	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	S	R	D	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	A	Q	G	R
Template Known Secondary structure				T	T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions