Job Description P0AEM6 Confidence 98.84% Date Thu Jan 5 11:23:43 GMT 2012 Rank 28 Aligned Residues 74 % Identity 16% Template d1h3la_ SCOP info Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors Resolution 2.37

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	E	G	V	M	D	K	H	S	L	W	Q	R	Y	V	P	L	V	R	H	E	A	L	R	L	Q	V	R	L	P	A	S	V	E	L	D	D	L	L	Q	A	G	G	I	G	L	L	N	A	V	E	R	Y	D	A	L	Q	G	T	A	F	T	T	Y	A	V	Q	R	I	R	G	A	M	L	D	E	L	R
Query Conservation
Alig confidence																															.	.	.																										.	.
Template Conservation																															.	.	.																										.	.
Template Sequence		T	A	E	R	S	A	R	F	E	R	D	A	L	E	F	L	D	Q	M	Y	S	A	A	L	R	M	T	R	N	.	.	.	P	A	D	A	E	D	L	V	Q	E	T	Y	A	K	A	Y	A	S	F	H	Q	F	R	E	G	.	.	T	N	L	K	A	W	L	Y	R	I	L	T	N	T	F	I	N	S	Y	R
Template Known Secondary structure																T													S		.	.	.																			G	G	G			S	S	.	.	S																	T
Template Predicted Secondary structure																															.	.	.																										.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions