Job Description P0AEM6 Confidence 98.51% Date Thu Jan 5 11:23:43 GMT 2012 Rank 29 Aligned Residues 133 % Identity 16% Template c3n0rA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:response regulator; PDBTitle: structure of the phyr stress response regulator at 1.25 angstrom2 resolution Resolution 1.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	W	Q	R	Y	V	P	L	V	R	H	E	A	L	R	L	Q	V	R	L	P	A	S	V	E	L	D	D	L	L	Q	A	G	G	I	G	L	L	N	A	V	E	R	Y	D	A	L	Q	G	T	A	F	T	T	Y	A	V	Q	R	I	R	G	A	M	L	D	E	L	R	S	R	D	W	V	P	R	S	V	R
Query Conservation
Alig confidence																						.	.	.																										.	.																												.	.	.
Template Conservation																						.	.	.																										.	.																												.	.	.
Template Sequence		A	R	L	A	P	H	L	P	Y	I	R	R	Y	A	R	A	L	T	G	D	.	.	.	Q	A	T	G	D	H	Y	V	R	V	A	L	E	A	L	A	A	G	E	L	V	L	D	A	N	.	.	L	S	P	R	V	A	L	Y	R	V	F	H	A	I	W	L	S	S	G	A	G	H	D	Q	G	L	H	.	.	.
Template Known Secondary structure					G	G	G													S		.	.	.																	T	T	S	S				S	S	.	.	S															S		T	T									.	.	.
Template Predicted Secondary structure																						.	.	.																										.	.																												.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	A	R	E	V	A	Q	A	I	G	Q	L	E	Q	E	L	G	R	N	A	T	E	T	E	V	A	E	R	L	G	I	D	I	A	D	Y	R	Q	M	L	L	D	T	N	N	S	Q	L	F	S	Y	D	E	W	R	E	E	H	G	D	S	I	E	L	V	T	D	D	H	Q	R	E	N	P	L	Q	Q	L	L
Query Conservation
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	N	L	R	Q	R	V	M	E	A	I	E	T	L	P	E	R	E	K	L	V	L	T	L	Y	Y	Q	E	E	L	N	L	K	E	I	G	A	V	L	E	V	G	E	S	R	V	S	Q	L	H	S	Q	A	I	K	R	L	R	T	K	L	G	K
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	A	G	D	D	A	A	Q	R	L	X	R	I	A	P	R	S	R	Q	A	F	L	L	T	A	L	E	G	F	T	P	T	E	A	A	Q	I	L	D	C	D	F	G	E	V	E	R	L	I	G	D	A	Q	A	E	I	D	A	E	L	A	T
Template Known Secondary structure		.	.	.	T	T	S										S												T	T												T																			T	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions