Job Description P0AEM6 Confidence 99.07% Date Thu Jan 5 11:23:43 GMT 2012 Rank 26 Aligned Residues 73 % Identity 18% Template c2o7gA_ PDB info PDB header:transcription Chain: A: PDB Molecule:probable rna polymerase sigma-c factor; PDBTitle: crystal structure of the pribnow box recognition region of sigc from2 mycobacterium tuberculosis Resolution 2.70 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	E	G	V	M	D	K	H	S	L	W	Q	R	Y	V	P	L	V	R	H	E	A	L	R	L	Q	V	R	L	P	A	S	V	E	L	D	D	L	L	Q	A	G	G	I	G	L	L	N	A	V	E	R	Y	D	A	L	Q	G	T	A	F	T	T	Y	A	V	Q	R	I	R	G	A	M	L	D	E	L	R
Query Conservation
Alig confidence																														.	.	.	.																									.	.
Template Conservation																														.	.	.	.																									.	.
Template Sequence		A	K	G	N	G	R	A	L	E	A	F	I	K	A	T	Q	Q	D	V	W	R	F	V	A	Y	L	S	D	.	.	.	.	V	G	S	A	D	D	L	T	Q	E	T	F	L	R	A	I	G	A	I	P	R	F	S	A	.	.	R	S	S	A	R	T	W	L	L	A	I	A	R	H	V	V	A	D	H	I	R
Template Known Secondary structure			T	T																								S		.	.	.	.																			G	G	G				.	.	S	S																		T
Template Predicted Secondary structure																														.	.	.	.																									.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions