|   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | |
|
. | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
|
|
. | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
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|
|  |  |  |  |
|
|
Query SS confidence |   |
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| . |
. |
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| . |
. |
. |
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Query Sequence |   |
A | V | L | P | E | L | L | T | A | L | D | C | A | P | . |
. |
Q | V | L | L | S | A | P | T | G | A | G | K | S | T | W | L | P | L | Q | L | L | A | H | P | G | I | N | G | K | I | I | L | L | E | P | R | R | L | A | A | R | N | V | A | Q | R | L | A | E | L | L | . |
. |
. |
N | E | K | P | G | D | T | V | G | Y |
Query Conservation |   |
  |   |   |   |   |
|   |   |
|
|   |   |   |   | . | . |   |
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|   |
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|   |
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|   |
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|   |   |   |   |   |   |
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|   |
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|   |
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|   |
|   |
|   |
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|   |   |
| . | . | . |
|   |   |
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|   |   |
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Alig confidence |   |
|
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| . | . |
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| . | . | . |
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|
Template Conservation |   |
  |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | A | H | Q | E | I | R | N | D | M | I | S | E | K | P | M | N | R | L | L | Q | G | D | V | G | S | G | K | T | V | V | A | Q | L | A | I | L | D | N | Y | E | A | G | F | Q | T | A | F | M | V | P | T | S | I | L | A | I | Q | H | Y | R | R | T | V | E | S | F | S | K | F | N | I | H | V | A | L | L | I | G | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | S | S | S |
|
|
|
|  |  |  |
|
| S | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S | S |
|
|  |  |  |
|
| S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
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|
|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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|
Template SS confidence |   |
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  |   |
375 | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . |
  |
  |   |
83 | . | . | . | . | . | . | |
|
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|
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  | . | . | . | . | . | . |  |
|
|
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|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |
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|
|  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
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|
| . |
. |
. |
. |
. |
. |
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Query Sequence |   |
R | M | R | A | Q | N | C | . |
. |
. |
. |
. |
. |
V | G | P | N | T | R | L | E | V | V | T | E | G | V | L | T | R | M | I | Q | R | D | P | E | L | S | G | V | G | L | V | I | L | D | E | F | H | E | R | S | L | Q | A | D | L | A | L | A | L | L | L | D | V | Q | Q | G | L | R | D | D | L | K | L | L | I | M | S |
Query Conservation |   |
  |
|
|   |
|   |   | . | . | . | . | . | . |   |
|   |   |
|   |
|   |
|   |
|   |
|   |
|
|   |   |
|   |   |
|   |   |
|   |   |   |   |   |
|
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|   |
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|   |   |   |   |
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|   |
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|   |   |   |   |   |   |   |
|   |
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|
Alig confidence |   |
|
|
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|
| . | . | . | . | . | . |
|
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| . | . | . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . |
|
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|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |
| . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |
|
|
Template Sequence |   |
T | T | P | S | E | K | E | K | I | K | S | G | L | R | N | G | Q | I | D | V | V | I | G | T | H | A | L | I | . |
. |
. |
. |
Q | E | D | V | H | F | K | N | L | G | L | V | I | I | D | E | Q | H | R | F | E | A | L | M | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | K | G | K | M | V | D | T | L | V | M | S |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  |  |  |  | S | S |
|
|
|  |  |  |  |
| T | T |  |  | . | . | . | . |  |  |
|
|
|
| S |
|
|
|  |  |  |  |  | S |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | S | S | S | S |
|
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|  |  |  |  | . | . | . | . |
|
|
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|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
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|
|
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|
  |   |
455 | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | |
|
|
|
. | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 510 | . | . | . | . | . | . | . | . |
  |
  |   |
157 | . | . | 160 | . | . | . | . | . | |
. | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  | . |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | T | L | D | N | D | R | L | Q | . |
Q | M | L | P | E | A | P | V | V | I | S | E | G | R | S |
Query Conservation |   |
|
|
|
|   |   |   |
|
| . |   |   |
|   |   |   |   |
|
|   |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|
Template Sequence |   |
A | T | P | I | P | R | S | M | A | L | A | F | Y | G | D | L | D | V | T | V | I | D | E | M | P |
Template Known Secondary structure |   |
S | S |
|
|
|  |  |  |  |  |  |  | T |
|
| S | S |
|  |  |  |
|
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
524 | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . |
  |