Job Description P37024 Confidence 99.81% Date Thu Jan 5 11:54:32 GMT 2012 Rank 70 Aligned Residues 172 % Identity 15% Template c3fmoB_ PDB info PDB header:oncoprotein/hydrolase Chain: B: PDB Molecule:atp-dependent rna helicase ddx19b; PDBTitle: crystal structure of the nucleoporin nup214 in complex with the dead-2 box helicase ddx19 Resolution 2.51 Å

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		8	.	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure														.	.																															.	.	.																																.	.
Query SS confidence														.	.																															.	.	.																																.	.
Query Sequence		A	V	L	P	E	L	L	T	A	L	D	C	.	.	A	P	Q	V	L	L	S	A	P	T	G	A	G	K	S	T	W	L	P	L	Q	L	L	A	H	P	G	I	N	G	.	.	.	K	I	I	L	L	E	P	R	R	L	A	A	R	N	V	A	Q	R	L	A	E	L	L	N	E	K	P	G	D	T	V	.	.
Query Conservation														.	.																															.	.	.																																.	.
Alig confidence														.	.																															.	.	.																																.	.
Template Conservation
Template Sequence		K	I	Q	E	N	A	L	P	L	M	L	A	E	P	P	Q	N	L	I	A	Q	S	Q	S	G	T	G	K	T	A	A	F	V	L	A	M	L	S	Q	V	E	P	A	N	K	Y	P	Q	C	L	C	L	S	P	T	Y	E	L	A	L	Q	T	G	K	V	I	E	Q	M	G	K	F	Y	P	E	L	K	L	A	Y
Template Known Secondary structure												T	S	S	S										T	T	S	S															T	T	S		S								S	S															T	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
			81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure		.																																	.	.
Query SS confidence		.																																	.	.
Query Sequence		.	G	Y	R	M	R	A	Q	N	C	V	G	P	N	T	R	L	E	V	V	T	E	G	V	L	T	R	M	I	Q	R	D	P	.	.	E	L	S	G	V	G	L	V	I	L	D	E	F	H	E	R	S	L	Q	A	D	L	A	L	A	L	L	L	D	V	Q	Q	G	L	R	D	D	L	K	L	L	I	M	S	A
Query Conservation		.																																	.	.
Alig confidence		.																																	.	.																							.
Template Conservation																																																											.
Template Sequence		A	V	R	G	N	K	L	E	R	G	Q	K	I	S	E	Q	I	V	I	G	T	P	G	T	V	L	D	W	C	S	K	L	K	F	I	D	P	K	K	I	K	V	F	V	L	D	E	A	D	V	M	I	A	T	Q	G	H	.	Q	D	Q	S	I	R	I	Q	R	M	L	P	R	N	C	Q	M	L	L	F	S	A
Template Known Secondary structure			S	T	T					T	T						S														T	T	T					G	G	G		S					T	T							S	T	T		.									T	T	S		T	T								S
Template Predicted Secondary structure																																																											.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		158	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		T	L	D	N	.	.	D	R	L	Q	Q	M	L	P	E	A	P	V	V	I	S	E	G	R	S
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		T	F	E	D	S	V	W	K	F	A	Q	K	V	V	P	D	P	N	V	I	K	L	K	R	E
Template Known Secondary structure															S	S	S
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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