Job Description P37024 Confidence 98.70% Date Thu Jan 5 11:54:32 GMT 2012 Rank 139 Aligned Residues 130 % Identity 15% Template c3dmdA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus Resolution 2.21 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		C	A	P	Q	V	L	L	S	A	P	T	G	A	G	K	S	T	W	L	P	L	Q	L	L	A	H	P	G	I	N	G	K	I	.	.	I	L	L	E	P	R	R	L	A	A	R	N	V	A	Q	R	L	A	E	L	L	N	E	K	P	G	D	T	V	G	Y	R	M	R	A	Q	N	C	V	G	P	N	T	R	L
Query Conservation																																			.	.
Alig confidence																																			.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	P	Y	V	I	M	F	V	G	F	N	G	S	G	K	T	T	T	I	A	K	L	A	N	W	L	K	N	H	G	F	S	V	V	I	A	A	S	D	T	F	R	A	G	A	I	E	Q	L	E	E	H	A	K	R	I	G	V	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I
Template Known Secondary structure		S										T	T	S	S															T	T										T	T															T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.																				.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		E	V	V	T	E	G	V	L	T	R	M	I	Q	R	D	P	E	.	.	.	L	S	G	V	G	L	V	I	L	D	E	F	H	E	R	S	L	Q	A	D	L	A	L	A	L	L	L	D	V	Q	Q	G	L	R	D	D	L	K	L	L	I	M	S	A	T	L	D	N	D	R	L	Q	Q	M	L
Query Conservation																			.	.	.
Alig confidence																			.	.	.													.
Template Conservation																																		.
Template Sequence		K	H	S	Y	G	A	D	P	A	A	V	A	Y	D	A	I	Q	H	A	K	A	R	G	I	D	V	V	L	I	D	T	A	.	G	R	S	E	T	N	R	N	L	M	D	E	M	K	K	I	A	R	V	T	K	P	N	L	V	I	F	V	G	D	A	L	A	G	N	A	I	V	E	Q	A	R
Template Known Secondary structure				S	T	T																		T		S								.	S	S			S	S	S																S								T	T		T	T	T
Template Predicted Secondary structure																																		.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions