|   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
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50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
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. | . | . | . | . | 70 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|
| . | . |
|  |  |  |  |
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|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
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| . |
. |
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| . |
. |
. |
. |
. |
. |
. |
. |
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Query Sequence |   |
P | V | A | A | V | L | P | E | L | L | T | A | L | D | C | A | P | Q | V | L | L | S | A | P | T | G | A | G | K | S | T | W | L | P | L | Q | L | L | A | H | P | G | I | N | G | . |
. |
K | I | I | L | L | E | P | R | R | L | A | A | R | N | V | . |
. |
. |
. |
. |
. |
. |
. |
A | Q | R | L | A | E | L | L | N | E |
Query Conservation |   |
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|   |   |   |   |   |   |
|   |   |
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|   |   |   |   |   |
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|   |
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|   |   |   |   |   |   |
| . | . |
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|   |
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|   |
|   | . | . | . | . | . | . | . | . |
|   |
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|   |   |
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|   |
Alig confidence |   |
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| . | . |
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| . | . | . | . | . | . | . | . |
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Template Conservation |   |
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|   |   |
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|   |   |   |   |   |   |   |   |   |   |
|   |
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|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
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|   |   |
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
P | K | T | L | G | Q | K | H | Y | V | D | A | I | D | T | N | T | I | V | F | G | L | G | P | A | G | S | G | K | T | Y | L | A | X | A | K | A | V | Q | A | L | Q | S | K | Q | V | S | R | I | I | L | T | R | P | A | V | E | A | G | E | K | L | G | F | L | P | G | D | P | Y | L | R | P | L | H | D | A | L | R | D |
Template Known Secondary structure |   |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |
| S |  |  |  |  |  |
|
| T | T | S | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| S |  |  |  |  |  |  |
| S |
|
| T | T |
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| S | S |
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| T | T | T |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
119 | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
  |
  |   |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |
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|  |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
Query SS confidence |   |
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Query Sequence |   |
K | P | G | D | T | V | G | Y | R | M | R | A | Q | N | C | V | G | P | N | T | R | L | E | V | V | T | E | G | V | L | T | R | M | I | Q | R | D | P | E | L | S | G | V | G | L | V | I | L | D | E | F | H | E | R | S | L | Q | A | D | L | A | L | A | L | L | L | D | V | Q | Q | G | L | R | D | D | L | K | L | L | I |
Query Conservation |   |
  |
|
|   |   |
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|   |
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|   |
|   |   |   |
|   |   |
|   |
|   |
|   |
|   |
|   |
|
|   |   |
|   |   |
|   |   |
|   |   |   |   |   |
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|   |
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|   |   |   |   |
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|   |
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|   |   |   |   |   |   |   |
|   |
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Alig confidence |   |
|
|
| . | . | . | . | . |
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| . | . | . | . | . | . | . |
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| . | . | . | . | . | . |
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|
Template Conservation |   |
  |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
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|
| . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|
Template Sequence |   |
X | V | E | . |
. |
. |
. |
. |
P | E | V | I | P | K | L | X | E | A | G | I | V | E | V | A | P | L | . |
. |
. |
. |
. |
. |
. |
A | Y | X | R | G | R | T | L | N | D | A | F | V | I | L | D | E | A | Q | . |
. |
. |
. |
. |
. |
N | T | T | P | A | Q | X | K | X | F | L | T | R | L | G | F | G | S | K | X | V | V |
Template Known Secondary structure |   |
T | S |
| . | . | . | . | . | T | T |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  | G | . | . | . | . | . | . | . | G | G | G | T | T |
|
| B |
| S |  |  |  |  |  |
| S | G | G | . | . | . | . | . | . | G |
|
|  |  |  |  |  |  |  |  | T | T | B |
| T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . | . | . |  |  |
|
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|
|  |  |  |  |  |
|  |  | . | . | . | . | . | . |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
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|
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|
  |   |
205 | . | . | |
|
|
|
|
. | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | |
|
|
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|
|
. | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | |
|
|
|
|
|
. | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . |
  |
  |   |
155 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
M |
Query Conservation |   |
|
Alig confidence |   |
|
Template Conservation |   |
  |
Template Sequence |   |
T |
Template Known Secondary structure |   |
 |
Template Predicted Secondary structure |   |
 |
Template SS confidence |   |
|
  |   |
267 |
  |