Job Description P37024 Confidence 100.00% Date Thu Jan 5 11:54:32 GMT 2012 Rank 15 Aligned Residues 405 % Identity 19% Template c2zj2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative ski2-type helicase; PDBTitle: archaeal dna helicase hjm apo state in form 1 Resolution 2.40 Å

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		7	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure											.																															.																											.	.
Query SS confidence											.																															.																											.	.
Query Sequence		A	A	V	L	P	E	L	L	T	.	A	L	D	C	A	P	Q	V	L	L	S	A	P	T	G	A	G	K	S	T	W	L	P	L	Q	L	L	A	H	P	.	G	I	N	G	K	I	I	L	L	E	P	R	R	L	A	A	R	N	V	A	Q	R	L	A	E	L	.	.	L	N	E	K	P	G	D	T	V	G	Y
Query Conservation											.																															.																											.	.
Alig confidence											.																															.																											.	.											.
Template Conservation																																																																																	.
Template Sequence		Y	P	P	Q	A	E	A	L	K	S	G	I	L	E	G	K	N	A	L	I	S	I	P	T	A	S	G	K	T	L	I	A	E	I	A	M	V	H	R	I	L	T	Q	G	G	K	A	V	Y	I	V	P	L	K	A	L	A	E	E	K	F	Q	E	F	Q	D	W	E	K	I	G	L	R	V	A	M	A	T	G	.
Template Known Secondary structure										T	T	T	G	G	G	T							S		G	G	G	T																		S							S	S	T	T	S								T	G	G	G	G	G	G	T								S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160
Predicted Secondary structure																																.																																																.
Query SS confidence																																.																																																.
Query Sequence		R	M	R	A	Q	N	C	V	G	P	N	T	R	L	E	V	V	T	E	G	V	L	T	R	M	I	Q	R	D	P	.	E	L	S	G	V	G	L	V	I	L	D	E	F	H	E	R	S	L	Q	A	D	L	A	L	A	L	L	L	D	V	Q	Q	G	L	R	D	D	L	K	L	L	I	M	S	A	T	L	.	D
Query Conservation																																.																																																.
Alig confidence																																.															.	.																																.
Template Conservation																																															.	.
Template Sequence		D	Y	D	S	K	D	E	W	L	G	K	Y	D	I	I	I	A	T	A	E	K	F	D	S	L	L	R	H	G	S	S	W	I	K	D	V	K	I	L	V	A	D	E	I	H	.	.	L	I	G	S	R	D	R	G	A	T	L	E	V	I	L	A	H	M	L	G	K	A	Q	I	I	G	L	S	A	T	I	G	N
Template Known Secondary structure				S				G	G	G	G	G		S																T		G	G	G	G	G								T	G	G	.	.	G	G	G		T	T	T												B	T	T	B										S
Template Predicted Secondary structure																																															.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.						.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.
Query SS confidence																																								.	.	.	.	.
Query Sequence		N	D	R	L	Q	Q	M	L	P	E	A	P	V	V	I	S	E	G	R	S	F	P	V	E	R	R	Y	L	P	L	P	A	H	Q	R	F	D	D	.	.	.	.	.	A	V	A	V	A	T	A	E	M	L	R	Q	E	S	G	S	L	L	L	F	L	P	G	V	G	E	I	Q	R	V	Q	E	Q	L	A	S	R
Query Conservation																																								.	.	.	.	.
Alig confidence										.																														.	.	.	.	.
Template Conservation										.
Template Sequence		P	E	E	L	A	E	W	L	.	N	A	E	L	I	V	S	D	W	R	P	V	K	L	R	R	G	V	F	Y	Q	G	F	V	T	W	E	D	G	S	I	D	R	F	S	S	W	E	E	L	V	Y	D	A	I	R	K	K	K	G	A	L	I	F	V	N	M	R	R	K	A	E	R	V	A	L	E	L	S	K	K
Template Known Secondary structure									T	.	T										S	S									T	T					T	T	S						S	S	T										T	T								S	S
Template Predicted Secondary structure										.
Template SS confidence
		182	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		236	.	.	.	240	.																															.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	S	D	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	C	P	L	Y	G	A	L	S	L	N	D	Q	R	K	A	I	L	P	A	P	Q	G	M	R	K	V	V	L	A	T	N	I	A	E	T	S	L	T	I	E	G	I	R
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	K	S	L	L	T	K	P	E	I	R	A	L	N	E	L	A	D	S	L	E	E	N	P	T	N	E	K	L	A	K	A	I	R	G	G	V	A	F	H	H	A	G	L	G	R	D	E	R	V	L	V	E	E	N	F	R	K	G	I	I	K	A	V	V	A	T	P	T	L	S	T	P	A	F	R	V	I	I	R
Template Known Secondary structure			G	G	G																S			S												T	T						T	T	S														T	T	S	S							S	T	T				B	S
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.				.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.				.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.																			.	.	.											.	.	.
Query SS confidence																																													.	.	.																			.	.	.											.	.	.
Query Sequence		L	V	V	D	C	A	Q	E	R	V	A	R	F	D	P	R	T	G	L	T	R	L	I	T	Q	R	V	S	Q	A	S	M	T	Q	R	A	G	R	A	G	R	L	E	.	.	.	P	G	I	S	L	H	L	I	A	K	E	Q	A	E	R	A	A	A	.	.	.	Q	S	E	P	E	I	L	Q	S	D	.	.	.
Query Conservation																																													.	.	.																			.	.	.											.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.																			.	.	.											.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	W	R	Y	S	D	F	G	M	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	P	I	I	E	V	H	Q	M	L	G	R	A	G	R	P	K	Y	D	E	V	G	E	G	I	I	V	S	T	S	D	D	P	R	E	V	M	N	H	Y	I	F	G	K	P	E	K	L	F	S	Q	L	S	N
Template Known Secondary structure			S					T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T	B			T	T	T		S									S	S	S										T	S	S									T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.															.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
					357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.														.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.						400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure		.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Query SS confidence		.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Query Sequence		.	.	.	L	S	G	L	L	M	E	L	L	Q	W	G	C	S	D	P	A	Q	M	.	.	.	.	.	.	.	.	.	.	.	.	.	S	W	L	D	Q	P	P	V	V	N	L	L	A	A	K	R	L	L	Q	M	L	G	A	L	.	.	.	.	.	E	G	E	R	L	S	A	Q	G	Q	K	M	A	A	L	G
Query Conservation		.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Alig confidence		.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template Conservation
Template Sequence		E	S	N	L	R	S	Q	V	L	A	L	I	A	T	F	G	Y	S	T	V	E	E	I	L	K	F	I	S	N	T	F	Y	A	Y	Q	R	K	D	T	Y	S	L	E	E	K	I	R	N	I	L	Y	F	L	L	E	N	E	F	I	E	I	S	L	E	D	K	I	R	P	L	S	L	G	I	R	T	A	K	L	Y
Template Known Secondary structure																S				S										T	S					T	T																				T	T	S					T	T																T
Template Predicted Secondary structure
Template SS confidence
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
		416	.	.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	P	R	L	A	A	M	L	V	S	A	K	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	P	Y	T	A	K	M	F	K	D	K	M	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		491	.	.	.	.	.	.	.	.	500	.	.	.	.