Job Description P37024 Confidence 100.00% Date Thu Jan 5 11:54:32 GMT 2012 Rank 17 Aligned Residues 291 % Identity 18% Template c2v6jA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:rna helicase; PDBTitle: kokobera virus helicase: mutant met47thr Resolution 2.30 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		A	P	Q	V	L	L	S	A	P	T	G	A	G	K	S	T	W	L	P	L	Q	L	L	A	H	P	G	I	N	G	.	K	I	I	L	L	E	P	R	R	L	A	A	R	N	V	A	Q	R	L	A	E	L	L	N	E	K	P	G	D	T	V	G	Y	R	M	R	A	Q	N	C	V	G	P	N	T	R	L	E	V
Query Conservation																																.
Alig confidence																																.																					.	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Template Sequence		R	E	L	T	V	L	D	L	H	P	G	A	G	K	T	R	R	V	L	P	Q	L	V	R	E	A	V	K	K	R	L	R	T	V	I	L	A	P	T	R	V	V	A	S	E	T	Y	E	A	L	R	.	.	.	.	.	.	.	.	.	.	.	G	E	P	I	R	Y	.	.	.	.	M	G	N	E	I	V	D	F
Template Known Secondary structure											T	T	S		T	T	T	T												T	T								S	S											T	T	.	.	.	.	.	.	.	.	.	.	.	T	S					.	.	.	.					S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.												.	.	.	.	.	.					.	60	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	E	G	V	L	T	R	M	I	Q	R	D	P	E	L	S	G	V	G	L	V	I	L	D	E	F	H	E	R	S	L	Q	A	D	L	A	L	A	L	L	L	D	V	Q	Q	G	L	R	D	D	L	K	L	L	I	M	S	A	T	L	D	N	D	R	L	Q	Q	M	L	P	E	A	P	V	V	I	S	E	G
Query Conservation
Alig confidence																																																.	.															.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.															.	.	.	.	.	.	.	.	.	.
Template Sequence		M	C	H	S	T	F	T	M	K	L	L	Q	G	V	R	V	P	N	Y	N	L	Y	I	M	D	E	A	H	F	L	D	P	A	S	V	A	A	R	G	Y	I	E	T	R	V	S	.	.	M	G	D	A	G	A	I	F	M	T	A	T	P	P	.	.	.	.	.	.	.	.	.	.	G	T	T	E	A	F	P	P
Template Known Secondary structure														T							S						T	T	T			S																.	.		T	S								S	S		T	.	.	.	.	.	.	.	.	.	.	T				S	S
Template Predicted Secondary structure																																																.	.															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.											.	.	.	.	140	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	F	P	V	E	R	R	Y	L	P	L	P	A	H	Q	R	F	D	D	A	V	A	V	A	T	A	E	M	L	R	Q	E	S	G	S	L	L	L	F	L	P	G	V	G	E	I	Q	R	V	Q	E	Q	L	A	S	R	I	G	S	D	V	L	L	C	P	L	Y	G	A	L	S	L	N	D	Q	R	K	A	I
Query Conservation
Alig confidence																					.	.	.	.	.	.																																	.	.	.												.	.	.	.
Template Conservation																					.	.	.	.	.	.																																	.	.	.												.	.	.	.
Template Sequence		S	N	S	P	I	I	D	E	E	T	R	I	P	D	K	A	W	N	S	.	.	.	.	.	.	G	Y	E	W	I	T	E	F	D	G	R	T	V	W	F	V	H	S	I	K	Q	G	A	E	I	G	T	C	L	Q	K	A	.	.	.	G	K	K	V	L	Y	L	N	R	K	T	.	.	.	.	F	E	S	E	Y
Template Known Secondary structure			S	S											S	S			S	S	.	.	.	.	.	.							S		S	S							S	S														T	.	.	.	T								T	T	T	.	.	.	.					S
Template Predicted Secondary structure																					.	.	.	.	.	.																																	.	.	.												.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.							.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.				.	.	.	.	.	200	.	.	.	.	.					.	.	.	.	210
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.			.	330	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		L	P	A	P	Q	G	M	R	K	V	V	L	A	T	N	I	A	E	T	S	L	T	I	E	G	I	R	L	V	V	D	C	A	Q	E	R	V	A	R	F	D	P	R	T	G	L	T	R	L	I	T	Q	R	V	S	Q	A	S	M	T	Q	R	A	G	R	A	G	R	L	E	.	.	P	G	I	S	L	H	L	I
Query Conservation																																																																								.	.
Alig confidence																										.																			.																											.	.
Template Conservation																										.																			.
Template Sequence		P	K	C	K	S	E	K	W	D	F	V	I	T	T	D	I	S	E	M	G	A	N	F	K	.	A	D	R	V	I	D	P	R	K	T	I	K	P	I	L	L	D	G	.	R	V	S	M	Q	G	P	I	A	I	T	P	A	S	A	A	Q	R	R	G	R	I	G	R	N	P	E	K	L	G	D	I	Y	A	Y	S
Template Known Secondary structure		T					S			S						G	G	G	T	T	S					.		S															S	S	.	S																			T	T	S	S			T	T
Template Predicted Secondary structure																										.																			.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	E	Q	A	E	R	A	A	A	Q	S	E	P	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	N	V	S	S	D	N	E	G	H	V	S	W	T	E	A
Template Known Secondary structure		S							T	T	B
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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