Job Description P37024 Confidence 100.00% Date Thu Jan 5 11:54:32 GMT 2012 Rank 20 Aligned Residues 309 % Identity 17% Template c2v1xB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:atp-dependent dna helicase q1; PDBTitle: crystal structure of human recq-like dna helicase Resolution 2.00 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	P	E	L	L	T	A	L	D	C	A	P	Q	V	L	L	S	A	P	T	G	A	G	K	S	T	W	L	P	L	Q	L	L	A	H	P	G	I	N	G	K	I	I	L	L	E	P	R	R	L	A	A	R	N	V	A	Q	R	L	A	E	L	L	N	E	K	P	G	D	T	V	G	Y	R	M	R	A	Q	N
Query Conservation
Alig confidence																																				.	.	.																								.
Template Conservation																																				.	.	.																								.
Template Sequence		L	Q	L	E	T	I	N	V	T	M	A	G	K	E	V	F	L	V	M	P	T	G	G	G	K	S	L	C	Y	Q	L	P	A	L	.	.	.	C	S	D	G	F	T	L	V	I	C	P	L	I	S	L	M	E	D	Q	L	M	V	L	.	K	Q	L	G	I	S	A	T	M	L	N	A	S	S	S	K	E	H	V
Template Known Secondary structure		T										T	T									T	T	S			T									.	.	.	S	S	S	S							S													.				T								S	S
Template Predicted Secondary structure																																				.	.	.																								.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		89									90	.	.	.	.	.	.	.	.	.	100	.	.							.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure			.	.	.	.	.	.	.	.														.	.	.	.	.	.																									.	.	.
Query SS confidence			.	.	.	.	.	.	.	.														.	.	.	.	.	.																									.	.	.
Query Sequence		C	.	.	.	.	.	.	.	.	V	G	P	N	T	R	L	E	V	V	T	E	G	.	.	.	.	.	.	V	L	T	R	M	I	Q	R	D	P	E	L	S	G	V	G	L	V	I	L	D	E	F	H	.	.	.	E	R	S	L	Q	A	D	L	A	L	A	L	L	L	D	V	Q	Q	G	L	R	D	D	L	K
Query Conservation			.	.	.	.	.	.	.	.														.	.	.	.	.	.																									.	.	.
Alig confidence			.	.	.	.	.	.	.	.														.	.	.	.	.	.																									.	.	.																				.
Template Conservation																																																																												.
Template Sequence		K	W	V	H	A	E	M	V	N	K	N	S	E	L	K	L	I	Y	V	T	P	E	K	I	A	K	S	K	M	F	M	S	R	L	E	K	A	Y	E	A	R	R	F	T	R	I	A	V	D	E	V	H	C	C	S	Q	W	G	H	D	F	R	P	D	Y	K	A	L	G	I	L	K	R	Q	.	F	P	N	A	S
Template Known Secondary structure											T	T										T					S														T	T									T	G	G	G	G	S	T	T	S	T	T			G	G	G	G	G	G							.		T	T	S
Template Predicted Secondary structure																																																																												.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.				.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.																																																	.
Query SS confidence												.	.	.																																																	.
Query Sequence		L	L	I	M	S	A	T	L	D	N	.	.	.	D	R	L	Q	Q	M	L	P	E	A	P	V	V	I	S	E	G	R	S	F	P	V	E	R	R	Y	L	P	L	P	A	H	Q	R	F	D	D	A	V	A	V	A	T	A	E	M	L	R	.	Q	E	S	G	S	L	L	L	F	L	P	G	V	G	E	I	Q	R
Query Conservation												.	.	.																																																	.
Alig confidence												.	.	.																																																	.
Template Conservation
Template Sequence		L	I	G	L	T	A	T	A	T	N	H	V	L	T	D	A	Q	K	I	L	C	I	E	K	C	F	T	F	T	A	S	F	N	R	P	N	L	Y	Y	E	V	R	Q	K	P	S	N	T	E	D	F	I	E	D	I	V	K	L	I	N	G	R	Y	K	G	Q	S	G	I	I	Y	C	F	S	Q	K	D	S	E	Q
Template Known Secondary structure							S	S													T	T			S											T	T										S	S													T	T	T	T	T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	E	Q	L	A	S	R	I	G	S	D	V	L	L	C	P	L	Y	G	A	L	S	L	N	D	Q	R	K	A	I	L	P	A	P	Q	G	M	R	K	V	V	L	A	T	N	I	A	E	T	S	L	T	I	E	G	I	R	L	V	V	D	C	A	Q	E	R	V	A	R	F	D	P	R	T	G	L	T	R	L
Query Conservation
Alig confidence										.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	T	V	S	L	Q	N	L	.	.	.	G	I	H	A	G	A	Y	H	A	N	L	E	P	E	D	K	T	T	V	H	R	K	W	S	A	N	E	I	Q	V	V	V	A	T	V	A	F	G	M	G	I	D	K	P	D	V	R	F	V	I	H	H	S	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	.	.	.	T								T	T	S														T	T	S	S	S						T	T	S		T	T				T	T							S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		330	.	.	.	.	.	.	.				.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		I	T	Q	R	V	S	Q	A	S	M	T	Q	R	A	G	R	A	G	R	L	.	E	P	G	I	S	L	H	L	I	A	K	E	Q	A	E	R
Query Conservation																						.
Alig confidence		.	.	.																		.
Template Conservation		.	.	.
Template Sequence		.	.	.	S	K	S	M	E	N	Y	Y	Q	E	S	G	R	A	G	R	D	D	M	K	A	D	C	I	L	Y	Y	G	F	G	D	I	F	R
Template Known Secondary structure		.	.	.		S	S									T	T	S		T	T	S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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