Return to main results Retrieve Phyre Job Id

Job DescriptionP37024
Confidence98.60%DateThu Jan 5 11:54:32 GMT 2012
Rank147Aligned Residues134
% Identity16%Templatec2og2A_
PDB info PDB header:protein transportChain: A: PDB Molecule:putative signal recognition particle receptor; PDBTitle: crystal structure of chloroplast ftsy from arabidopsis2 thaliana
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50..... ....60.........70.........80.........90......
Predicted Secondary structure 













..















Query SS confidence 




































. .








































Query Sequence  CAPQVLLSAPTGAGKSTWLPLQLLAHPGINGKIILLE. . PRRLAARNVAQRLAELLNEKPGDTVGYRMRAQNCVGPNTRL
Query Conservation      


 








 


 

      





 ..


 

 
 
 


  

  

  


 

 
   
  
 
Alig confidence 




































..





























...........
Template Conservation     

  


 
 




 



      
  
 

  
  
  
 


   
    
           ...........
Template Sequence  KPAVIMIVGVNGGGKTTSLGKLAHRLKNEGTKVLMAAGDTFRAAASDQLEIWAERTGCEIVVAEGDKAK. . . . . . . . . . .
Template Known Secondary structure  SS

TTS
TT





S
T


SSSS

...........
Template Predicted Secondary structure 

























...........
Template SS confidence 















































































   125....130.........140.........150.........160.........170.........180.........190...
 
   97..100.........110.........120.........130.........140..... ....150.........160........
Predicted Secondary structure 




















......








Query SS confidence 
















































. . . . . .






















Query Sequence  EVVTEGVLTRMIQRDPELSGVGLVILDEFHERSLQADLALALLLDVQQG. . . . . . LRDDLKLLIMSATLDNDRLQQML
Query Conservation   
 
 
 

  
  
  
     




 


    

 



      ...... 
 











   

  
Alig confidence  ....
























.


















......






















Template Conservation  ....                 
 





.

      
  

  
           
    


 

          
Template Sequence  . . . . AATVLSKAVKRGKEEGYDVVLCDTS. GRLHTNYSLMEELIACKKAVGKIVSGAPNEILLVLDGNTGLNMLPQAR
Template Known Secondary structure  ....TT
S

.

SS

STT

SGGGGGGG
Template Predicted Secondary structure  ....






.

















Template SS confidence 













































































   194.....200.........210........ .220.........230.........240.........250.........260......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions