Job Description P37024 Confidence 99.34% Date Thu Jan 5 11:54:32 GMT 2012 Rank 127 Aligned Residues 147 % Identity 22% Template c2j7pA_ PDB info PDB header:signal recognition Chain: A: PDB Molecule:signal recognition particle protein; PDBTitle: gmppnp-stabilized ng domain complex of the srp gtpases ffh2 and ftsy Resolution 1.97 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.														.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Query Sequence		P	V	A	A	V	L	P	E	L	L	T	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	D	C	A	P	Q	V	L	L	S	A	P	T	G	A	G	K	S	T	W	L	P	L	Q	L	L	A	H	P	G	I	N	G	K	.	.	I	I	L	L	E	P	R	R	L	A	A	R	N	V	A	Q	R	L	A
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation
Template Sequence		P	A	E	V	I	L	A	T	V	Y	E	A	L	K	E	A	L	G	G	E	A	R	L	P	V	L	K	D	R	N	L	W	F	L	V	G	L	Q	G	S	G	K	T	T	T	A	A	K	L	A	L	Y	Y	K	G	K	G	R	R	P	L	L	V	A	A	D	T	Q	R	P	A	A	R	E	Q	L	R	L	L	G
Template Known Secondary structure																		T	T	S	S								S	S								S	T	T	S	S														T	T	T											S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	L	N	E	K	P	G	D	T	V	G	Y	R	M	R	A	Q	N	C	V	G	P	N	T	R	L	E	V	V	T	E	G	V	L	T	R	M	I	Q	R	D	P	E	L	S	G	V	G	L	V	I	L	D	E	F	H	E	R	S	L	Q	A	D	L	A	L	A	L	L	L	D	V	Q	Q	G	L	R	D	D
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Sequence		E	K	V	G	V	P	V	L	E	V	M	D	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	E	S	I	R	R	R	V	E	E	K	A	R	L	E	A	R	D	L	I	L	V	D	T	A	G	.	R	L	Q	I	D	E	P	L	M	G	E	L	A	R	L	K	E	V	L	G	P	D
Template Known Secondary structure					T								T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T	T											.			T	T																		S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.																	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	L	L	I	M	S	A	T	L	D	N	D	R	L	Q	Q	M	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	L	L	V	L	D	A	M	T	G	Q	E	A	L	S	V	A	R
Template Known Secondary structure									T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions