Job Description P68688 Confidence 98.07% Date Thu Jan 5 12:11:08 GMT 2012 Rank 52 Aligned Residues 75 % Identity 17% Template c3lykA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:stringent starvation protein a homolog; PDBTitle: structure of stringent starvation protein a homolog from2 haemophilus influenzae Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	I	F	G	R	S	G	C	P	Y	C	V	R	A	K	D	L	A	E	K	L	S	N	E	R	D	D	F	Q	Y	Q	Y	V	D	I	R	A	E	G	I	T	K	E	D	L	Q	Q	K	A	G	K	P	V	E	T	V	P	Q	I	F	V	D	Q	Q	H	I	G	G	Y	T	D	F	A	A	W	V	K	E	N
Query Conservation
Alig confidence																												.	.	.																		.	.	.	.	.
Template Conservation																												.	.	.																		.	.	.	.	.
Template Sequence		X	T	L	F	S	N	K	D	D	I	Y	C	H	Q	V	K	I	V	L	A	E	K	G	V	L	Y	.	.	.	E	N	A	E	V	D	L	Q	A	L	P	E	D	L	X	E	L	.	.	.	.	.	N	P	Y	G	T	V	P	T	L	V	D	R	D	L	V	L	F	N	S	R	I	I	X	E	Y	L	D	E	R
Template Known Secondary structure								T	T															T				.	.	.							T	T	S									.	.	.	.	.		T	T			S						T	T					S
Template Predicted Secondary structure																												.	.	.																		.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		83	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	P	H
Template Known Secondary structure		S		S
Template Predicted Secondary structure
Template SS confidence
		83	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions