Job Description P68688 Confidence 97.13% Date Thu Jan 5 12:11:08 GMT 2012 Rank 156 Aligned Residues 84 % Identity 21% Template c3ghaA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:disulfide bond formation protein d; PDBTitle: crystal structure of etda-treated bdbd (reduced) Resolution 1.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.					.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.
Predicted Secondary structure																			.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	T	V	I	F	G	R	S	G	C	P	Y	C	V	R	A	K	.	.	.	.	D	L	A	E	K	L	S	N	E	R	D	D	F	Q	Y	Q	Y	V	D	I	R	A	E	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	V	E	F	G	D	Y	K	C	P	S	C	K	V	F	N	S	D	I	F	P	K	I	Q	K	D	F	I	D	K	G	D	V	K	F	S	F	V	N	V	M	F	H	G	K	G	S	R	L	A	A	L	A	S	E	E	V	W	K	E	D	P	D	S	F	W	D	F	H	E	K	L	F	E	K	Q	P	D	T
Template Known Secondary structure									T	T											T								T	T	T	T	T	S											S																			G	G	G														S	S
Template Predicted Secondary structure
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
																																							44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	K	E	D	L	Q	Q	K	A	G	K	P	V	E	T	V	P	Q	I	F	V	D	Q	Q	H	I	G	G	Y	.	.	.	T	D	F	A	A	W	V	K	E	N	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Conservation
Template Sequence		E	Q	E	W	V	T	P	G	L	L	G	D	L	A	K	S	T	T	K	I	K	P	E	T	L	K	E	N	L	D	K	E	T	F	A	S	Q	V	E	K	D	S	D	L	N	Q	K	M	N	I	Q	A	T	P	T	I	Y	V	N	D	K	V	I	K	N	F	A	D	Y	D	E	I	K	E	T	I	E	K	E	L
Template Known Secondary structure		S	S																S	S	S												T	T	T														T	T			S	S						T	T				S		T	T
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		84	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		220	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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