 |
Job Description | P76440 | Confidence | 98.98% | Date | Thu Jan 5 12:23:00 GMT 2012 |
Rank | 236 | Aligned Residues | 114 |
% Identity | 23% | Template | d1lpfa2 |
SCOP info | FAD/NAD(P)-binding domain
| FAD/NAD(P)-binding domain
| FAD/NAD-linked reductases, N-terminal and central domains
|
Resolution | 2.80 |
|
 |
  |   |
232 | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | |
|
|
. | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
| . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | V | E | I | A | V | D | F | L | Q | R | A | R | Q | A | Q | G | D | I | S | I | P | Q | S | A | L | I | I | G | G | G | D | V | A | M | D | V | A | S | T | L | K | V | L | G | C | Q | A | V | T | C | V | A | R | E | E | L | . |
. |
. |
D | E | F | P | A | S | E | K | E | F | T | S | A | R | E | L | G | V | S | I |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|
|
|   |   |
|   |
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |
|
|
|
|
|   |   |
|   |
|   |
|   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
Template Sequence |   |
P | A | P | L | S | D | D | I | I | V | D | S | T | G | A | L | E | F | Q | A | V | P | K | K | L | G | V | I | G | A | G | V | I | G | L | E | L | G | S | V | W | A | R | L | G | A | E | V | T | V | L | E | A | L | D | K | F | L | P | A | A | D | E | Q | I | A | K | E | A | L | K | V | L | T | K | Q | G | L | N | I |
Template Known Secondary structure |   |
|
|
|
|
| T | T | T |  |  |
|  |  |  |  | T | T |
| S | S |
|
| S |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| S | S | S | S | S | S | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |
|  |  |  |  |  |
|  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
159 | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . |
  |
  |   |
309 | 310 | . | . | . | . | . | . | . | |
|
. | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |  | . | . |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | D | G | F | T | P | V | A | V | . |
. |
E | G | N | K | V | T | F | K | H | V | R | L | S | G | E | L | T | M | A | A | D | K | I | I | L | A | V | G |
Query Conservation |   |
  |   |   |   |   |
|   |   |
| . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |
|
|
|
Template Sequence |   |
R | L | G | A | R | V | T | A | S | E | V | K | K | K | Q | V | T | V | T | F | T | D | A | N | G | E | Q | K | E | T | F | D | K | L | I | V | A | V | G |
Template Known Secondary structure |   |
 | T | T |
|  |  |  |  |
|
|  |  | T | T |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  | S |
|  |  |  |
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
239 | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|