|   |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | |
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | V | C | P | T | E | K | L | C | Q | S | G | C | T | R | A | G | V | D | A | P | I | D | I | G | R | L | Q | R | F | V | T | D | F | E | Q | Q | T | G | M | E | I | Y | Q | P | . |
G | T | K | T | L | G | K | V | A | I | I | G | A | G | P | A | G | L | Q | A | S | V | T | L | T | N | Q | G | Y | D | V | T | I | Y |
Query Conservation |   |
|
|
|
|   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| . |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|   |
|   |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|   |   |
|   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |   |
|   |   |
|   |
|   |
Template Sequence |   |
R | V | C | I | G | C | N | V | C | I | S | R | W | E | I | G | . |
. |
. |
. |
G | P | P | M | I | C | T | Q | N | A | T | A | G | E | E | Y | R | R | G | W | H | P | E | K | F | R | Q | T | K | N | K | D | S | V | L | I | V | G | A | G | P | S | G | S | E | A | A | R | V | L | M | E | S | G | Y | T | V | H | L | T |
Template Known Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | S | . | . | . | . | S | S |
|
|
|
| S | S |
| T | T | T | T | T |  |  |  |  |
|
|
| S | S |
|
|
|
|
| S | S |
|
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
| . | . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
343 | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | |
|
|
|
. | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . |
  |
  |   |
154 | . | . | . | . | . | 160 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|  |  |  |  | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | K | E | A | H | P | G | G | W | L | R | N | . |
. |
. |
. |
. |
G | I | P | Q | F | R | L | P | Q | S | V | L | D | A | E | I | A | R | I | E | K | M | G | V | T | I | K | C | N | N | E | V | G | N | T | L | T | L | E | Q | L | K | A | E | N | R | A | V | L | V | T | V | G | L | S | S | G | S | G | L | P | L | F |
Query Conservation |   |
|   |   |   |   |   |
|
|   |   |   |   | . | . | . | . | . |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
D | T | A | E | K | I | G | G | H | L | N | Q | V | A | A | L | P | G | L | G | E | W | S | Y | H | R | D | Y | R | E | T | Q | I | T | K | L | L | K | K | N | K | E | S | Q | L | A | L | G | Q | K | P | M | T | A | D | D | V | L | Q | Y | G | A | D | K | V | I | I | A | T | G | A | S | E | C | T | L | W | N | E | L |
Template Known Secondary structure |   |
| S | S | S | S | T | T | T | T |  |  |  |  | T | T | S | T | T |
| G | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T |
|  |  |  |
| S |
|
|
|
|
|  |  |  |  |  | T | S |
|
| S |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
419 | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . |
  |
  |   |
229 | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | H | S | D | V | E | I | A | V | D | F | L | Q | R | A | R | Q | A | Q | G | D | I | S | I | P | Q | S | A | L | I | I | G | G | G | D | V | A | M | D | V | A | S | T | L | K | V | L | G | C | Q | A | V | T | C | V | A | R | E | E | L | D | E | F | P | A | S |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|
|
|   |   |
|   |
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |
|   |
|
|
|   |
|   |   |
|   |
|   |
|   |   |
|   |   |   |
|   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
K | A | R | E | S | E | W | A | E | N | D | I | K | G | I | Y | L | I | G | . |
. |
. |
D | A | E | A | P | R | L | I | A | D | A | T | F | T | G | H | R | V | A | R | E | I | E | E | A | N | P | Q | I | A | I | P | Y | K | R | E | T | I | A | W | G | T | P | H |
Template Known Secondary structure |   |
 |  | T | T |  |  |  |  |  | T | T |
|
|  |  |  |  |
| G | . | . | . | G | G | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S | S |
| T | T | S |
|
|
|
|
|
|
|
|
|
| T | T |
|
| S |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
655 | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | |
|
|
. | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . |
  |