Job Description P76440 Confidence 100.00% Date Thu Jan 5 12:23:00 GMT 2012 Rank 35 Aligned Residues 281 % Identity 21% Template c3r9uA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin reductase; PDBTitle: thioredoxin-disulfide reductase from campylobacter jejuni. Resolution 2.36 Å

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		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.									.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.
Query Sequence		K	V	A	I	I	G	A	G	P	A	G	L	Q	A	S	V	T	L	T	N	Q	G	Y	D	V	T	I	Y	E	K	E	A	H	P	G	G	W	L	R	N	.	.	.	.	.	.	.	.	G	I	P	Q	F	R	L	P	Q	S	V	L	D	A	E	I	A	R	I	E	K	M	G	V	T	I	K	C	N	N	E	V
Query Conservation																																										.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	A	I	I	G	G	G	P	A	G	L	S	A	G	L	Y	A	T	R	G	G	L	K	N	V	V	X	F	E	K	G	X	P	G	G	Q	I	T	S	S	S	E	I	E	N	Y	P	G	V	A	Q	V	X	D	G	I	S	F	X	A	P	W	S	E	Q	C	X	R	F	G	L	K	H	E	X	V	G	V	E
Template Known Secondary structure									S														T		S							S	S	S	T	T	G	G	G	G	G		S		B			S	T	T			S		B														T	T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		198	.	200	.	.	.	.	.	.	.	.	.							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure														.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.
Query Sequence		G	N	T	L	T	L	E	Q	L	K	A	E	.	.	.	.	.	.	N	R	A	V	L	V	T	V	G	L	S	S	G	S	G	L	P	L	F	E	H	S	D	V	E	I	A	V	D	F	L	Q	R	A	R	Q	A	Q	G	D	I	S	I	P	Q	S	A	L	I	I	G	G	G	D	V	A	M	D	V	A	S	T
Query Conservation														.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.
Template Conservation
Template Sequence		Q	I	L	K	N	S	D	G	S	F	T	I	K	L	E	G	G	K	T	E	L	A	K	A	V	I	V	C	T	G	S	A	P	K	K	A	G	F	K	G	E	D	E	F	F	G	K	G	V	S	T	C	A	T	C	D	G	F	F	Y	K	N	K	E	V	A	V	L	G	G	G	D	T	A	L	E	E	A	L	Y
Template Known Secondary structure							T	T	S							T	T	S																						B	T	T	T	T	T	B	T	T	T			S						G	G	G	G	T	T	S								B
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.					330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.
Query SS confidence																																																												.	.	.	.
Query Sequence		L	K	V	L	G	C	Q	A	V	T	C	V	A	R	E	E	L	D	E	F	P	A	S	E	K	E	F	T	S	A	R	E	L	G	V	S	I	I	D	G	F	T	P	V	A	V	E	G	N	K	V	T	F	K	H	V	R	L	.	.	.	.	S	G	E	L	T	M	A	A	D	K	I	I	L	A	V	G	Q	H
Query Conservation																																																												.	.	.	.
Alig confidence																	.	.																																										.	.	.	.
Template Conservation																	.	.
Template Sequence		L	A	N	I	C	S	K	I	Y	L	I	H	R	R	D	.	.	E	F	R	A	A	P	S	T	V	E	K	V	K	K	N	E	K	I	E	L	I	T	S	A	S	V	D	E	V	Y	G	D	K	X	G	V	A	G	V	K	V	K	L	K	D	G	S	I	R	D	L	N	V	P	G	I	F	T	F	V	G	L	N
Template Known Secondary structure				T	T	S	S							S	S	S	.	.	S		B	S												T	T						S										T	T										T	T	S								S						S
Template Predicted Secondary structure																	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		348	.	350	.	.	.	.									.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.		.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.																															.
Query SS confidence									.	.	.	.	.	.	.	.																															.
Query Sequence		A	R	L	D	A	F	A	.	.	.	.	.	.	.	.	E	L	E	P	Q	R	N	T	I	K	T	Q	N	Y	Q	T	R	D	P	Q	V	F	A	A	G	D	I	V	E	G	.	D	K	T	V	V	Y	A	V	K	T	G	K	E	A	A	E	A	I	H	H	Y	L	E	G
Query Conservation									.	.	.	.	.	.	.	.																															.
Alig confidence									.	.	.	.	.	.	.	.																															.
Template Conservation
Template Sequence		V	R	N	E	I	L	K	Q	D	D	S	K	F	L	C	N	X	E	E	G	G	Q	V	S	V	D	L	K	X	Q	T	S	V	A	G	L	F	A	A	G	D	L	R	K	D	A	P	K	Q	V	I	C	A	A	G	D	G	A	V	A	A	L	S	A	X	A	Y	I	E	S
Template Known Secondary structure					G	G	G	B		T	T	S		B	S	S		B		T	T	S		B				T	T		B		S	S	T	T					G	G	G	B	T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions