Job Description P76440 Confidence 99.38% Date Thu Jan 5 12:23:00 GMT 2012 Rank 153 Aligned Residues 212 % Identity 16% Template c3nrnA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein pf1083; PDBTitle: crystal structure of pf1083 protein from pyrococcus furiosus,2 northeast structural genomics consortium target pfr223 Resolution 2.10 Å

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		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.													.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Query Sequence		G	K	V	A	I	I	G	A	G	P	A	G	L	Q	A	S	V	T	L	T	N	Q	G	Y	D	V	T	I	Y	E	K	E	A	H	P	G	G	W	L	R	N	.	.	.	.	.	.	.	.	.	.	.	.	G	I	P	Q	F	R	L	P	Q	S	V	L	D	A	E	I	A	R	I	E	K	M	.	.	.	.	.
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Template Conservation
Template Sequence		X	R	A	V	V	V	G	A	G	L	G	G	L	L	A	G	A	F	L	A	R	N	G	H	E	I	I	V	L	E	K	S	A	X	I	G	G	R	F	T	N	L	P	Y	K	G	F	Q	L	S	T	G	A	L	H	X	I	P	H	G	E	D	G	P	L	A	H	L	L	R	I	L	G	A	K	V	E	I	V	N
Template Known Secondary structure								S		S													T	T								S	S	S	S	S		T	T	S	S					T	T					S	S	S		S			T	T	T	T	S	S										T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
					188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	G	V	T	I	K	C	N	N	E	V	G	N	T	L	T	L	E	Q	L	K	A	E	N	R	A	V	L	V	T	V	G	L	S	S	G	S	G	L	P	L	F	E	H	S	D	V	E	I	A	V	D	F	L	Q	R	A	R	Q	A	Q	G	D	I	S	I	P	Q	S	A	L	I	I	G	G	G	D	V
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		S	N	P	K	G	K	I	L	W	E	G	K	I	F	H	Y	R	E	S	W	K	F	L	S	K	L	L	A	E	I	R	X	N	K	L	P	K	E	E	I	P	A	D	E	W	I	K	E	K	I	G	E	N	E	F	L	L	S	V	L	E	S	F	A	G	W	A	D	S	V	S	L	S	D	L	T	A	L	E	L
Template Known Secondary structure			S	S	S						T	T					G	G	G	G	G	G	G										T	T							S	B									T																			S	S		G	G	G	S	B
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	D	V	A	S	T	L	K	V	L	G	C	Q	A	V	T	C	V	A	R	E	E	L	D	E	F	P	A	S	E	K	E	F	T	S	A	R	E	L	G	V	S	I	I	D	G	F	T	P	V	A	V	E	G	N	K	V	T	F	K	H	V	R	L	S	G	E	L	T	M	A	A	D	K	I	I	L	A	V
Query Conservation
Alig confidence																		.	.	.	.	.	.																																						.	.	.
Template Conservation																		.	.	.	.	.	.																																						.	.	.
Template Sequence		A	K	E	I	R	A	A	L	R	W	G	G	P	G	L	I	.	.	.	.	.	.	R	G	G	C	K	A	V	I	D	E	L	E	R	I	I	X	E	N	K	G	K	I	L	T	R	K	E	V	V	E	I	N	I	E	E	K	K	.	.	.	V	Y	T	R	D	N	E	E	Y	S	F	D	V	A	I	S	N	V
Template Known Secondary structure													S					.	.	.	.	.	.	T	T															T	T	T					S	S								T	T	T	T		.	.	.				T	T							S						S
Template Predicted Secondary structure																		.	.	.	.	.	.																																						.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.							.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.				.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		345
Predicted Secondary structure
Query SS confidence
Query Sequence		G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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