Job Description P76440 Confidence 99.97% Date Thu Jan 5 12:23:00 GMT 2012 Rank 65 Aligned Residues 285 % Identity 19% Template c3kpgA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:sulfide-quinone reductase, putative; PDBTitle: crystal structure of sulfide:quinone oxidoreductase from2 acidithiobacillus ferrooxidans in complex with decylubiquinone Resolution 2.30 Å

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		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.				.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.																.	.
Query SS confidence																								.	.	.																.	.
Query Sequence		G	K	V	A	I	I	G	A	G	P	A	G	L	Q	A	S	V	T	L	T	N	Q	.	.	.	G	Y	D	V	T	I	Y	E	K	E	A	H	P	G	G	.	.	W	L	R	N	G	I	P	Q	F	R	L	P	Q	S	V	L	D	A	E	I	A	R	I	E	K	M	G	V	T	I	K	C	N	N	E	V	G	N
Query Conservation																								.	.	.																.	.
Alig confidence																								.	.	.																.	.
Template Conservation
Template Sequence		A	H	V	V	I	L	G	A	G	T	G	G	M	P	A	A	Y	E	M	K	E	A	L	G	S	G	H	E	V	T	L	I	S	A	N	D	Y	F	Q	F	V	P	S	N	P	W	V	G	V	G	W	K	E	R	D	D	I	A	F	P	I	R	H	Y	V	E	R	K	G	I	H	F	I	A	Q	S	A	E	Q	I
Template Known Secondary structure										S	T	T														T	T	S							S	S	S					G	G	G							T	S	S															T	T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		200						.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230							.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure			.	.	.	.	.						.																										.	.	.	.	.	.																																	.	.	.	.	.
Query SS confidence			.	.	.	.	.						.																										.	.	.	.	.	.																																	.	.	.	.	.
Query Sequence		T	.	.	.	.	.	L	T	L	E	Q	.	L	K	A	E	N	R	A	V	L	V	T	V	G	L	S	S	G	S	G	L	P	L	F	E	H	.	.	.	.	.	.	S	D	V	E	I	A	V	D	F	L	Q	R	A	R	Q	A	Q	G	D	I	S	I	P	Q	S	A	L	I	I	G	G	G	.	.	.	.	.
Query Conservation			.	.	.	.	.						.																										.	.	.	.	.	.																																	.	.	.	.	.
Alig confidence			.	.	.	.	.						.																										.	.	.	.	.	.																																	.	.	.	.	.
Template Conservation
Template Sequence		D	A	E	A	Q	N	I	T	L	A	D	G	N	T	V	H	Y	D	Y	L	M	I	A	T	G	P	K	L	A	F	E	N	V	P	G	S	D	P	H	E	G	P	V	Q	S	I	C	T	V	D	H	A	E	R	A	F	A	E	Y	Q	A	L	L	R	E	P	G	P	I	V	I	G	A	M	A	G	A	S	C	F
Template Known Secondary structure			T	T	T	T					T	T	S						S												G	G	G	S	T	T		S	T	T	T	S	S					S	S																	S										T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
						263	.	.	.	.	.	.	270	.	.	.	.	.	.	.					.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.								.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																.	.	.	.																			.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																.	.	.	.																			.	.	.	.	.	.	.
Query Sequence		.	.	.	.	D	V	A	M	D	V	A	S	T	L	K	V	L	G	C	.	.	.	.	Q	A	V	T	C	V	A	R	E	E	L	D	E	F	P	A	S	E	.	.	.	.	.	.	.	K	E	F	T	S	A	R	E	L	G	V	S	I	I	D	G	F	T	P	V	A	V	E	G	N	K	V	T	F	K	H	V
Query Conservation		.	.	.	.																.	.	.	.																			.	.	.	.	.	.	.
Alig confidence		.	.	.	.																.	.	.	.																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	P	A	Y	E	Y	A	M	I	V	A	S	D	L	K	K	R	G	M	R	D	K	I	P	S	F	T	F	I	T	S	E	P	Y	I	G	H	L	G	I	Q	G	V	G	D	S	K	G	I	L	T	K	G	L	K	E	E	G	I	E	A	Y	T	N	C	K	V	T	K	V	E	D	N	K	M	Y	V	T	Q	V
Template Known Secondary structure																			T		G	G	G		S							S	S	S	S	T	T		T	T	T	T			T	T												T	T						S								T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		328	.	330	.	.	.	.					.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.				.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.	.	380	.	.	.													.	.	.	.
Predicted Secondary structure									.	.	.	.																					.	.	.																.															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.																					.	.	.																.															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	S	G	E	L	T	.	.	.	.	M	A	A	D	K	I	I	L	A	V	G	Q	H	A	R	L	D	A	F	A	.	.	.	E	L	E	P	Q	R	N	T	I	K	T	Q	N	Y	Q	.	T	R	D	P	Q	V	F	A	A	G	D	I	V	E	.	.	.	.	.	.	.	.	.	.	.	.	G	D	K	T
Query Conservation									.	.	.	.																					.	.	.																.															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.																					.	.	.																.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	E	K	G	E	T	I	K	E	M	V	L	P	V	K	F	G	M	M	I	P	A	F	K	G	V	P	A	V	A	G	V	E	G	L	C	N	P	G	G	F	V	L	V	D	E	H	Q	R	S	K	K	Y	A	N	I	F	A	A	G	I	A	I	A	I	P	P	V	E	T	T	P	V	P	T	G	A	P	K	T
Template Known Secondary structure			T	T	S											S																T	S	T	T	T	B		T	T	S		B		B		T	T	S	B	B	S	S		T	T					G	G	G	B					S				S	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	Y	A	V	K	T	G	K	E	A	A	E	A	I	H	H	Y	L	E	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Y	M	I	E	S	M	V	S	A	A	V	H	N	I	K	A	D	L	E	G	R
Template Known Secondary structure																				T	T	T
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions