Job Description P76440 Confidence 99.97% Date Thu Jan 5 12:23:00 GMT 2012 Rank 69 Aligned Residues 266 % Identity 21% Template c3kljA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nad(fad)-dependent dehydrogenase, nirb-family (n-terminal PDBTitle: crystal structure of nadh:rubredoxin oxidoreductase from clostridium2 acetobutylicum Resolution 2.10 Å

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.				.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.
Query SS confidence																																									.	.	.
Query Sequence		T	L	G	K	V	A	I	I	G	A	G	P	A	G	L	Q	A	S	V	T	L	T	N	Q	G	Y	D	V	T	I	Y	E	K	E	A	H	P	G	G	.	.	.	W	L	R	N	G	I	P	Q	F	R	L	P	Q	S	V	L	D	A	E	I	A	R	I	E	K	M	G	V	T	I	K	C	N	N	E	V	G	N
Query Conservation																																									.	.	.
Alig confidence																																									.	.	.
Template Conservation
Template Sequence		K	S	T	K	I	L	I	L	G	A	G	P	A	G	F	S	A	A	K	A	A	L	G	K	C	D	D	I	T	M	I	N	S	E	K	Y	L	P	Y	Y	R	P	R	L	N	E	I	I	A	K	N	K	S	I	D	D	I	L	I	K	K	N	D	W	Y	E	K	N	N	I	K	V	I	T	S	E	F	A	T	S
Template Known Secondary structure			B		S							S											T	T	T		S							S	S	S	S			B		G	G	G							S				G	G	G	T	B	S	S								T	T						S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		200	.	.	.	.	.	.	.	.	.						210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure												.	.	.	.	.
Query SS confidence												.	.	.	.	.
Query Sequence		T	L	T	L	E	Q	L	K	A	E	.	.	.	.	.	N	R	A	V	L	V	T	V	G	L	S	S	G	S	G	L	P	L	F	E	H	S	D	V	E	I	A	V	D	F	L	Q	R	A	R	Q	A	Q	G	D	I	S	I	P	Q	S	A	L	I	I	G	G	G	D	V	A	M	D	V	A	S	T	L	K	V
Query Conservation												.	.	.	.	.
Alig confidence												.	.	.	.	.
Template Conservation
Template Sequence		I	D	P	N	N	K	L	V	T	L	K	S	G	E	K	I	K	Y	E	K	L	I	I	A	S	G	S	I	A	N	K	I	K	V	P	H	A	D	E	I	F	S	L	Y	S	Y	D	D	A	L	K	I	K	D	E	C	K	N	K	G	K	A	F	I	I	G	G	G	I	L	G	I	E	L	A	Q	A	I	I	D
Template Known Secondary structure				T	T	T	T					T	T	S						S																T	T		S						S	S															S								S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.					.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																									.	.	.	.
Query SS confidence																									.	.	.	.
Query Sequence		L	G	C	Q	A	V	T	C	V	A	R	E	E	L	D	E	F	P	A	S	E	K	E	.	.	.	.	F	T	S	A	R	E	L	G	V	S	I	I	D	G	F	T	P	V	A	V	E	G	N	K	V	T	F	K	H	V	R	L	S	G	E	L	T	M	A	A	D	K	I	I	L	A	V	G	Q	H	A	R	L
Query Conservation																									.	.	.	.
Alig confidence																									.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	G	T	P	A	S	I	G	I	I	L	E	Y	P	L	E	R	Q	L	D	R	D	G	G	L	F	L	K	D	K	L	D	R	L	G	I	K	I	Y	T	N	S	N	F	E	E	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	L	I	R	S	S	C	V	I	T	A	V	G	V	K	P	N	L
Template Known Secondary structure			T								S	S	S	S	S		T	T	T	S														T	T	T						S			G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.							S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.															.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		351	.	.	.			.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.					.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure						.	.																															.	.	.	.
Query SS confidence						.	.																															.	.	.	.
Query Sequence		D	A	F	A	.	.	E	L	E	P	Q	R	N	T	I	K	T	Q	N	Y	Q	T	R	D	P	Q	V	F	A	A	G	D	I	V	E	G	.	.	.	.	D	K	T	V	V	Y	A	V	K	T	G	K	E	A	A	E	A	I
Query Conservation						.	.																															.	.	.	.
Alig confidence						.	.																															.	.	.	.
Template Conservation
Template Sequence		D	F	I	K	D	T	E	I	A	S	K	R	G	I	L	V	N	D	H	M	E	T	S	I	K	D	I	Y	A	C	G	D	V	A	E	F	Y	G	K	N	P	G	L	I	N	I	A	N	K	Q	G	E	V	A	G	L	N	A
Template Known Secondary structure		G	G	G	T	T	S				B	S	S	S					T	T		B		S	S	T	T					G	G	G				T	T	B
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions