Phyre 2 alignment of P76440 with c3hyxC

Job Description P76440
Confidence 99.97% Date Thu Jan 5 12:23:00 GMT 2012

Rank 56 Aligned Residues 284

% Identity 15% Template c3hyxC_

PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:sulfide-quinone reductase; PDBTitle: 3-d x-ray structure of the sulfide:quinone oxidoreductase from aquifex2 aeolicus in complex with aurachin c

Resolution 2.90 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																								.	.															.	.
Query SS confidence																								.	.															.	.
Query Sequence	G	K	V	A	I	I	G	A	G	P	A	G	L	Q	A	S	V	T	L	T	N	Q	G	.	.	Y	D	V	T	I	Y	E	K	E	A	H	P	G	G	.	.	W	L	R	N	G	I	P	Q	F	R	L	P	Q	S	V	L	D	A	E	I	A	R	I	E	K	M	G	V	T	I	K	C	N	N	E	V	G	N	T
Query Conservation																								.	.															.	.
Alig confidence																								.	.															.	.
Template Conservation
Template Sequence	K	H	V	V	V	I	G	G	G	V	G	G	I	A	T	A	Y	N	L	R	N	L	M	P	D	L	K	I	T	L	I	S	D	R	P	Y	F	G	F	T	P	A	F	P	H	L	A	M	G	W	R	K	F	E	D	I	S	V	P	L	A	P	L	L	P	K	F	N	I	E	F	I	N	E	K	A	E	S	I	D
Template Known Secondary structure								S	S															T	T								S	S	S					G	G	G							T		S		G	G	G	G				S	T	T	T	G	G	G	G	T						S
Template Predicted Secondary structure
Template SS confidence
	3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.

	201	.	.	.	.	.	.	.	.							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.											.	.
Predicted Secondary structure										.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.
Query Sequence	L	T	L	E	Q	L	K	A	E	.	.	.	.	.	.	N	R	A	V	L	V	T	V	G	L	S	S	G	S	G	L	P	L	F	E	H	S	D	V	E	I	A	V	D	F	L	Q	R	A	R	Q	A	Q	G	D	I	S	I	P	Q	S	A	L	I	I	G	G	G	.	.	.	.	.	.	.	.	.	.	D	V
Query Conservation										.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	P	D	A	N	T	V	T	T	Q	S	G	K	K	I	E	Y	D	Y	L	V	I	A	T	G	P	K	L	V	F	G	A	E	G	Q	E	E	N	S	T	S	I	C	T	A	E	H	A	L	E	T	Q	K	K	L	Q	E	L	Y	A	N	P	G	P	V	V	I	G	A	I	P	G	V	S	F	G	P	A	Y	E	F
Template Known Secondary structure	T	T	T	T					T	T							S														S	B	T						B			S	S																	S										T	T
Template Predicted Secondary structure
Template SS confidence
	83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.

	265	.	.	.	.	270	.	.	.	.	.	.	.	.				.	280	.	.	.	.	.	.	.	.	.	290	.	.	.								.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure															.	.	.																.	.	.	.	.	.	.
Query SS confidence															.	.	.																.	.	.	.	.	.	.
Query Sequence	A	M	D	V	A	S	T	L	K	V	L	G	C	Q	.	.	.	A	V	T	C	V	A	R	E	E	L	D	E	F	P	A	.	.	.	.	.	.	.	S	E	K	E	F	T	S	A	R	E	L	G	V	S	I	I	D	G	F	T	P	V	A	V	E	G	N	K	V	T	F	K	H	V	R	L	S	G	E	L	T
Query Conservation															.	.	.																.	.	.	.	.	.	.
Alig confidence															.	.	.																.	.	.	.	.	.	.																																	.
Template Conservation																																																																								.
Template Sequence	A	L	M	L	H	Y	E	L	K	K	R	G	I	R	Y	K	V	P	M	T	F	I	T	S	E	P	Y	L	G	H	F	G	V	G	G	I	G	A	S	K	R	L	V	E	D	L	F	A	E	R	N	I	D	W	I	A	N	V	A	V	K	A	I	E	P	D	K	V	I	Y	E	.	D	L	N	G	N	T	H	E
Template Known Secondary structure											T	T		G	G	G								S	S	S	S	T	T		T	T	T	T		S	T	T												T	T						S								S	S						.		T	T	S
Template Predicted Secondary structure																																																																								.
Template SS confidence
	164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.

	335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.						.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.	.	380	.	.	.													.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.																.															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.																.															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	M	A	A	D	K	I	I	L	A	V	G	Q	H	A	R	L	D	A	F	A	.	.	.	.	.	E	L	E	P	Q	R	N	T	I	K	T	Q	N	Y	Q	.	T	R	D	P	Q	V	F	A	A	G	D	I	V	E	.	.	.	.	.	.	.	.	.	.	.	.	G	D	K	T	V	V	Y	A	V	K	T	G	K
Query Conservation																					.	.	.	.	.																.															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.																.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	V	P	A	K	F	T	M	F	M	P	S	F	Q	G	P	E	V	V	A	S	A	G	D	K	V	A	N	P	A	N	K	M	V	I	V	N	R	C	F	Q	N	P	T	Y	K	N	I	F	G	V	G	V	V	T	A	I	P	P	I	E	K	T	P	I	P	T	G	V	P	K	T	G	M	M	I	E	Q	M	A	M
Template Known Secondary structure				S																	S		T	T	T	B		T	T	T			B				T	T	S	B		S	S		T	T					S	T	T	B					S	S			S	S
Template Predicted Secondary structure
Template SS confidence
	243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

	397	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	E	A	A	E	A	I	H	H	Y	L	E	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence	A	V	A	H	N	I	V	N	D	I	R	N	N
Template Known Secondary structure											T	T
Template Predicted Secondary structure
Template SS confidence
	323	.	.	.	.	.	.	330	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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