Job Description P76440 Confidence 99.96% Date Thu Jan 5 12:23:00 GMT 2012 Rank 78 Aligned Residues 278 % Identity 17% Template c3ctyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin reductase; PDBTitle: crystal structure of t. acidophilum thioredoxin reductase Resolution 2.35 Å

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		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.							.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.
Query Sequence		K	V	A	I	I	G	A	G	P	A	G	L	Q	A	S	V	T	L	T	N	Q	G	Y	D	V	T	I	Y	E	K	E	A	H	P	G	G	W	L	R	N	G	.	.	.	.	.	.	I	P	Q	F	R	L	P	Q	S	V	L	D	A	E	I	A	R	I	E	K	M	G	V	T	I	K	C	N	N	E	V	G	N
Query Conservation																																											.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	V	I	V	G	A	G	A	A	G	F	S	A	A	V	Y	A	A	R	S	G	F	S	V	A	I	L	D	K	A	V	A	G	G	L	T	A	E	A	P	L	V	E	N	Y	L	G	F	K	S	I	V	G	S	E	L	A	K	L	F	A	D	H	A	A	N	Y	A	K	I	R	E	G	V	E	V	R	S	I
Template Known Secondary structure									S													T	T								S	S	S	T	T	G	G	G	G	G		S		B			B	T	T	B	S	S	B															T	T	S					T
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240					.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.
Query SS confidence																																											.	.	.	.
Query Sequence		T	L	T	L	E	Q	L	K	A	E	N	R	A	V	L	V	T	V	G	L	S	S	G	S	G	L	P	L	F	E	H	S	D	V	E	I	A	V	D	F	L	.	.	.	.	Q	R	A	R	Q	A	Q	G	D	I	S	I	P	Q	S	A	L	I	I	G	G	G	D	V	A	M	D	V	A	S	T	L	K	V	L
Query Conservation																																											.	.	.	.
Alig confidence																																											.	.	.	.
Template Conservation
Template Sequence		K	K	T	Q	G	G	F	D	I	E	T	N	D	D	T	Y	H	A	K	Y	V	I	I	T	T	G	T	T	H	K	H	L	G	V	K	G	E	S	E	Y	F	G	K	G	T	S	Y	C	S	T	C	D	G	Y	L	F	K	G	K	R	V	V	T	I	G	G	G	N	S	G	A	I	A	A	I	S	M	S	E	Y
Template Known Secondary structure					T	T							S	S	S																					B	T	T	T	T	T	B	T	T	T			S						G	G	G	G	B	T	S								S											T	T	T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.						330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																																																								.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.
Query Sequence		G	C	Q	A	V	T	C	V	A	R	E	E	L	D	E	F	P	A	S	E	K	E	F	T	S	A	R	E	L	G	V	S	I	I	D	G	F	T	P	V	A	V	E	G	N	K	V	T	F	K	H	V	R	L	.	.	.	.	.	S	G	E	L	T	M	A	A	D	K	I	I	L	A	V	G	Q	H	A	R	L
Query Conservation																																																								.	.	.	.	.
Alig confidence					.	.	.																																																	.	.	.	.	.
Template Conservation					.	.	.
Template Sequence		V	K	N	.	.	.	V	T	I	I	E	Y	M	P	K	Y	M	C	E	N	A	Y	V	Q	E	I	K	K	R	N	I	P	Y	I	M	N	A	Q	V	T	E	I	V	G	D	G	K	K	V	T	G	V	K	Y	K	D	R	T	T	G	E	E	K	L	I	E	T	D	G	V	F	I	Y	V	G	L	I	P	Q	T
Template Known Secondary structure		B	S		.	.	.						S	S	S	S			S											T	T						S									S	S	S	S									T	T	T									S
Template Predicted Secondary structure					.	.	.
Template SS confidence
		178	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		351	.	.	.					.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.																																.
Query SS confidence						.	.	.	.																																.
Query Sequence		D	A	F	A	.	.	.	.	E	L	E	P	Q	R	N	T	I	K	T	Q	N	Y	Q	T	R	D	P	Q	V	F	A	A	G	D	I	V	E	G	D	.	K	T	V	V	Y	A	V	K	T	G	K	E	A	A	E	A	I	H	H	Y	L
Query Conservation						.	.	.	.																																.
Alig confidence						.	.	.	.																																.
Template Conservation
Template Sequence		S	F	L	K	D	S	G	V	K	L	D	E	R	G	Y	I	V	V	D	S	R	Q	R	T	S	V	P	G	V	Y	A	A	G	D	V	T	S	G	N	F	A	Q	I	A	S	A	V	G	D	G	C	K	A	A	L	S	L	Y	S	D	S
Template Known Secondary structure		G	G	G	T	T	S				B		T	T	S		B				T	T		B		S	S	T	T					S	T	T	B	T	T
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions