Job Description P76440 Confidence 99.94% Date Thu Jan 5 12:23:00 GMT 2012 Rank 83 Aligned Residues 264 % Identity 22% Template c2vq7B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:flavin-containing monooxygenase; PDBTitle: bacterial flavin-containing monooxygenase in complex with2 nadp: native data Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.							.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	A	I	I	G	A	G	P	A	G	L	Q	A	S	V	T	L	T	N	Q	.	.	.	.	.	.	G	Y	D	V	T	I	Y	E	K	E	A	H	P	G	G	W	L	R	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																							.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	A	I	L	G	A	G	P	S	G	M	A	Q	L	R	A	F	Q	S	A	Q	E	K	G	A	E	I	P	E	L	V	C	F	E	K	Q	A	D	W	G	G	Q	W	N	Y	T	W	R	T	G	L	D	E	N	G	E	P	V	H	S	S	M	Y	R	Y	L	W	S	N	G	P	K	E	C	L	E	F	A	D
Template Known Secondary structure									S																T	T											S	S	S	S	S		G	G	G	S			S			S	B		T	T	S	S	B							T	T		B		S	S		G	G	G	S		B	T	T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
												167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.																	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																									.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																									.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	I	P	Q	F	R	L	P	Q	S	V	L	D	A	E	I	A	R	I	E	K	M	G	V	T	.	.	I	K	C	N	N	E	V	G	N	T	L	T	L	E	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	E	N	R	A	V	L	V	T	V	G
Query Conservation		.	.	.	.	.	.	.	.	.	.																									.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																									.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	T	F	D	E	H	F	G	K	P	I	A	S	Y	P	P	R	E	V	L	W	D	Y	I	K	G	R	V	E	K	A	G	V	R	K	Y	I	R	F	N	T	A	V	R	H	V	E	F	N	E	D	S	Q	T	F	T	V	T	V	Q	D	H	T	T	D	T	I	Y	S	A	A	F	D	Y	V	V	C	C	T	G
Template Known Secondary structure		B							S	S				S	S		B																T		G	G	G				S										T	T	T	T									T	T	T	T								S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	S	G	S	G	L	P	L	F	E	H	S	D	V	E	I	A	V	D	F	L	Q	R	A	R	Q	A	Q	G	D	I	S	I	P	Q	S	A	L	I	I	G	G	G	D	V	A	M	D	V	A	S	T	L	K	V	L	G	C	Q	A	V	T	C	V	A	R	E	E	L	D	E	F	P	A	S	E	K	E	F
Query Conservation
Alig confidence																				.																																																											.	.	.
Template Conservation																				.																																																											.	.	.
Template Sequence		H	F	S	T	P	Y	V	P	E	F	E	G	F	E	K	F	G	G	.	R	I	L	H	A	H	D	F	R	D	A	L	E	F	K	D	K	T	V	L	L	V	G	S	S	Y	S	A	E	D	I	G	S	Q	C	Y	K	Y	G	A	K	K	L	I	S	C	Y	R	T	A	P	M	G	Y	K	W	P	E	.	.	.
Template Known Secondary structure		S	S	S								B	T	T	T	T			S	.					G	G	G				G	G	G	G	T	T								S	S													T	T		S							S	S	S								T	.	.	.
Template Predicted Secondary structure																				.																																																											.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.					.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370				.
Predicted Secondary structure																																																										.	.	.	.																	.	.	.
Query SS confidence																																																										.	.	.	.																	.	.	.
Query Sequence		T	S	A	R	E	L	G	V	S	I	I	D	G	F	T	P	V	A	V	E	G	N	K	V	T	F	K	H	V	R	L	S	G	E	L	T	M	A	A	D	K	I	I	L	A	V	G	Q	H	A	R	L	D	A	F	A	.	.	.	.	E	L	E	P	Q	R	N	T	I	K	T	Q	N	Y	Q	T	.	.	.	R
Query Conservation																																																										.	.	.	.																	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																.	.	.	.	.																													.	.	.	.																	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	N	W	D	E	R	P	N	L	V	R	V	D	T	E	N	.	.	.	.	.	A	Y	F	A	D	G	S	S	E	K	V	D	A	I	I	L	C	T	G	Y	I	H	H	F	P	F	L	N	D	D	L	R	L	V	T	N	N	R	L	W	P	L	N	L	Y	K	G	V	V	W	E	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	T												S	S		.	.	.	.	.				T	T	S						S													T	T	B		T	T	T						S		S	S		S	S			T	T	T			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																.	.	.	.	.
Template SS confidence
										245	.	.	.	.	250	.	.	.	.	.	.	.	.	.						260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	Q	V	F	A	A	G	D	I	V	E	G	D	K	T	V	V	Y	A	V	K	T	G	K	E	A	A	E	A	I	H	H	Y	L	E	G	A	C	S
Query Conservation
Alig confidence										.	.	.	.								.
Template Conservation										.	.	.	.								.
Template Sequence		N	P	K	F	F	Y	I	G	.	.	.	.	M	Q	D	Q	W	Y	S	.	F	N	M	F	D	A	Q	A	W	Y	A	R	D	V	I	M	G	R	L	P
Template Known Secondary structure			T	T					S	.	.	.	.		S			S	S		.																T	T	S	S
Template Predicted Secondary structure										.	.	.	.								.
Template SS confidence
		312	.	.	.	.	.	.	.					320	.	.	.	.	.	.		.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions