Job Description P76440 Confidence 99.96% Date Thu Jan 5 12:23:00 GMT 2012 Rank 74 Aligned Residues 285 % Identity 18% Template c2q7vA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin reductase; PDBTitle: crystal structure of deinococcus radiodurans thioredoxin2 reductase Resolution 1.90 Å

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		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.								.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.
Query Sequence		G	T	K	T	L	G	K	V	A	I	I	G	A	G	P	A	G	L	Q	A	S	V	T	L	T	N	Q	G	Y	D	V	T	I	Y	E	K	E	A	H	P	G	G	W	L	R	N	G	.	.	.	.	.	.	.	I	P	Q	F	R	L	P	Q	S	V	L	D	A	E	I	A	R	I	E	K	M	G	V	T	I	K
Query Conservation																																																	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	T	A	H	D	Y	D	V	V	I	I	G	G	G	P	A	G	L	T	A	A	I	Y	T	G	R	A	Q	L	S	T	L	I	L	E	K	G	M	P	G	G	Q	I	A	W	S	E	E	V	E	N	F	P	G	F	P	E	P	I	A	G	M	E	L	A	Q	R	M	H	Q	Q	A	E	K	F	G	A	K	V	E
Template Known Secondary structure															S													T	T								S	S		T	T	G	G	G	G	G		S		B			S	T	T		S	S		B																T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.									210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.
Query Sequence		C	N	N	E	V	G	N	T	L	T	L	E	Q	L	K	A	E	.	.	.	.	.	.	.	.	N	R	A	V	L	V	T	V	G	L	S	S	G	S	G	L	P	L	F	E	H	S	D	V	E	I	A	V	D	F	L	Q	R	A	R	Q	A	Q	G	D	I	S	I	P	Q	S	A	L	I	I	G	G	G	D	V
Query Conservation																			.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	D	E	V	Q	G	V	Q	H	D	A	T	S	H	P	Y	P	F	T	V	R	G	Y	N	G	E	Y	R	A	K	A	V	I	L	A	T	G	A	D	P	R	K	L	G	I	P	G	E	D	N	F	W	G	K	G	V	S	T	C	A	T	C	D	G	F	F	Y	K	G	K	K	V	V	V	I	G	G	G	D	A
Template Known Secondary structure												T	T	S	S	S								S	S																						T	T	T	T	T	T	B	T	T	T			S						G	G	G	G	T	T									S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.					330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure																																																																			.	.	.	.
Query SS confidence																																																																			.	.	.	.
Query Sequence		A	M	D	V	A	S	T	L	K	V	L	G	C	Q	A	V	T	C	V	A	R	E	E	L	D	E	F	P	A	S	E	K	E	F	T	S	A	R	E	L	G	V	S	I	I	D	G	F	T	P	V	A	V	E	G	N	K	V	T	F	K	H	V	R	L	.	.	.	.	S	G	E	L	T	M	A	A	D	K	I
Query Conservation																																																																			.	.	.	.
Alig confidence															.	.																																																			.	.	.	.
Template Conservation															.	.
Template Sequence		A	V	E	E	G	M	F	L	T	K	F	A	D	.	.	E	V	T	V	I	H	R	R	D	T	L	R	A	N	K	V	A	Q	A	R	A	F	A	N	P	K	M	K	F	I	W	D	T	A	V	E	E	I	Q	G	A	D	S	V	S	G	V	K	L	R	N	L	K	T	G	E	V	S	E	L	A	T	D	G	V
Template Known Secondary structure										T	T	T		S	.	.							S	S	S	S			S										T		T	T						S									S	S	S									T	T	T									S
Template Predicted Secondary structure															.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.				.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure																.	.	.																																.
Query SS confidence																.	.	.																																.
Query Sequence		I	L	A	V	G	Q	H	A	R	L	D	A	F	A	.	.	.	E	L	E	P	Q	R	N	T	I	K	T	Q	N	Y	Q	T	R	D	P	Q	V	F	A	A	G	D	I	V	E	G	D	.	K	T	V	V	Y	A	V	K	T	G	K	E	A	A	E	A	I	H	H	Y	L
Query Conservation																.	.	.																																.
Alig confidence																.	.	.																																.
Template Conservation
Template Sequence		F	I	F	I	G	H	V	P	N	T	A	F	V	K	D	T	V	S	L	R	D	D	G	Y	V	D	V	R	D	E	I	Y	T	N	I	P	M	L	F	A	A	G	D	V	S	D	Y	I	Y	R	Q	L	A	T	S	V	G	A	G	T	R	A	A	M	M	T	E	R	Q	L
Template Known Secondary structure					S					S		G	G	G	T	T	T	S		B		T	T	S		B			B	T	T	T	B		S	S	T	T					S	T	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions