Job Description P76440 Confidence 99.00% Date Thu Jan 5 12:23:00 GMT 2012 Rank 232 Aligned Residues 187 % Identity 20% Template c2olnA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nikd protein; PDBTitle: nikd, an unusual amino acid oxidase essential for2 nikkomycin biosynthesis: closed form at 1.15 a resolution Resolution 1.15 Å

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		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160										.	.	.	.	.	.	.	.	.				170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.										.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.										.	.	.
Query Sequence		V	A	I	I	G	A	G	P	A	G	L	Q	A	S	V	T	L	T	N	Q	G	Y	D	V	T	I	Y	E	K	E	A	H	P	G	.	.	.	.	.	.	.	.	.	G	W	L	R	N	G	I	P	Q	.	.	.	F	R	L	P	Q	S	V	L	D	A	E	I	A	R	I	E	K	M	G	V	T	I	K	C	N
Query Conservation																																				.	.	.	.	.	.	.	.	.										.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation
Template Sequence		V	V	V	V	G	G	G	P	V	G	L	A	T	A	W	Q	V	A	E	R	G	H	R	V	L	V	L	E	R	H	T	F	F	N	E	N	G	G	T	S	G	A	E	R	H	W	R	L	Q	Y	T	Q	E	D	L	F	R	L	T	L	E	T	L	P	L	W	R	A	L	E	S	R	C	E	R	R	L	I	H	E
Template Known Secondary structure								S													T	T								S	S		T	T		S	S	S	S			S	S						S			S	S																						T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	V	G	N	T	L	T	L	E	Q	L	K	A	E	N	R	A	V	L	V	T	V	G	L	S	S	G	S	G	L	P	L	F	E	H	S	D	V	E	I	A	V	D	F	L	Q	R	A	R	Q	A	Q	G	D	I	S	I	P	Q	S	A	L	I	I	G	G	G	D	V	A	M	D	V	A	S	T	L	K	V
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	S	L	W	F	G	D	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	T	N	E	G	Q	I	S	G	T	A	A	M	M	D	K	L	S	V	R	Y	E	W	L	K	A	T	D	I	E	R	R	F	G	F	R	G	L	P
Template Known Secondary structure										S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B	T	T	B												T	T																			S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.																															.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	C	Q	A	V	T	C	V	A	R	E	E	L	D	E	F	P	A	S	E	K	E	F	T	S	A	R	E	L	G	V	S	I	I	D	G	F	T	P	V	A	V	E	G	N	K	V	T	F	K	H	V	R	L	S	G	E	L	T	M	A	A	D	K	I	I	L	A	V	G
Query Conservation
Alig confidence																																																											.	.
Template Conservation																																																											.	.
Template Sequence		R	D	Y	E	G	F	L	Q	P	D	G	G	T	I	D	V	R	G	T	L	A	A	L	F	T	L	A	Q	A	A	G	A	T	L	R	A	G	E	T	V	T	E	L	V	P	D	A	D	G	V	S	V	T	T	D	R	G	.	.	T	Y	R	A	G	K	V	V	L	A	C	G
Template Known Secondary structure		T	T							T	T																				T	T						S										T	T							S	S		.	.												G
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions