Job Description P76440 Confidence 99.97% Date Thu Jan 5 12:23:00 GMT 2012 Rank 63 Aligned Residues 270 % Identity 21% Template c1xhcA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh oxidase /nitrite reductase; PDBTitle: nadh oxidase /nitrite reductase from pyrococcus furiosus pfu-1140779-2 001 Resolution 2.35 Å

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		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.				.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																						.	.	.
Query SS confidence																																						.	.	.
Query Sequence		K	V	A	I	I	G	A	G	P	A	G	L	Q	A	S	V	T	L	T	N	Q	G	Y	D	V	T	I	Y	E	K	E	A	H	P	G	G	.	.	.	W	L	R	N	G	I	P	Q	F	R	L	P	Q	S	V	L	D	A	E	I	A	R	I	E	K	M	G	V	T	I	K	C	N	N	E	V	G	N	T	L	T
Query Conservation																																						.	.	.
Alig confidence																						.																.	.	.
Template Conservation																						.
Template Sequence		K	V	V	I	V	G	N	G	P	G	G	F	E	L	A	K	Q	L	S	Q	.	T	Y	E	V	T	V	I	D	K	E	P	V	P	Y	Y	S	K	P	M	L	S	H	Y	I	A	G	F	I	P	R	N	R	L	F	P	Y	S	L	D	W	Y	R	K	R	G	I	E	I	R	L	A	E	E	A	K	L	I	D	R
Template Known Secondary structure									S											T	T	.	T	S							S	S	S	S					S	T	T						T	T	S	S		G	G	G	G		S	S									T						S								T
Template Predicted Secondary structure																						.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		203	.	.	.	.	.	.					210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		L	E	Q	L	K	A	E	.	.	.	.	N	R	A	V	L	V	T	V	G	L	S	S	G	S	G	L	P	L	F	E	H	S	D	V	E	I	A	V	D	F	L	Q	R	A	R	Q	A	Q	G	D	I	S	I	P	Q	S	A	L	I	I	G	G	G	D	V	A	M	D	V	A	S	T	L	K	V	L	G	C	Q
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.
Template Conservation
Template Sequence		G	R	K	V	V	I	T	E	K	G	E	V	P	Y	D	T	L	V	L	A	T	G	A	R	A	R	E	P	Q	I	K	G	K	E	Y	L	L	T	L	R	T	I	F	D	A	D	R	I	K	E	S	I	E	N	S	G	E	A	I	I	I	G	G	G	F	I	G	L	E	L	A	G	N	L	A	E	A	G	Y	H
Template Known Secondary structure		T	T	T					S	S						S															S	B	T	G	G	G						S															S								S													T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		279	280	.	.	.	.	.	.	.	.	.	290	.	.			.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure																.	.																																																															.	.
Query SS confidence																.	.																																																															.	.
Query Sequence		A	V	T	C	V	A	R	E	E	L	D	E	F	P	.	.	A	S	E	K	E	F	T	S	A	R	E	L	G	V	S	I	I	D	G	F	T	P	V	A	V	E	G	N	K	V	T	F	K	H	V	R	L	S	G	E	L	T	M	A	A	D	K	I	I	L	A	V	G	Q	H	A	R	L	D	A	F	A	.	.
Query Conservation																.	.																																																															.	.
Alig confidence																.	.																																	.	.	.	.	.	.																									.	.
Template Conservation																																																		.	.	.	.	.	.
Template Sequence		V	K	L	I	H	R	G	A	M	F	L	G	L	D	E	E	L	S	N	M	I	K	D	M	L	E	E	T	G	V	K	F	F	L	N	S	E	L	L	E	A	N	E	E	G	V	L	T	.	.	.	.	.	.	N	S	G	F	I	E	G	K	V	K	I	C	A	I	G	I	V	P	N	V	D	L	A	R	R	S
Template Known Secondary structure							S	S	S			T	T																T	T						S								S	S					.	.	.	.	.	.	T	T						S																		T
Template Predicted Secondary structure																																																		.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.							.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.					.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure																																.	.	.	.
Query SS confidence																																.	.	.	.
Query Sequence		E	L	E	P	Q	R	N	T	I	K	T	Q	N	Y	Q	T	R	D	P	Q	V	F	A	A	G	D	I	V	E	G	.	.	.	.	D	K	T	V	V	Y	A	V	K	T	G	K	E	A	A	E	A	I
Query Conservation																																.	.	.	.
Alig confidence																																.	.	.	.
Template Conservation
Template Sequence		G	I	H	T	G	R	G	I	L	I	D	D	N	F	R	T	S	A	K	D	V	Y	A	I	G	D	C	A	E	Y	S	G	I	I	A	G	T	A	K	A	A	M	E	Q	A	R	V	L	A	D	I	L
Template Known Secondary structure		T			B	S	S	S					T	T	S	B		S	S	T	T					G	G	G			B	T	T	B				S
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions