Job Description P76440 Confidence 99.95% Date Thu Jan 5 12:23:00 GMT 2012 Rank 79 Aligned Residues 289 % Identity 17% Template c1x31A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:sarcosine oxidase alpha subunit; PDBTitle: crystal structure of heterotetrameric sarcosine oxidase from2 corynebacterium sp. u-96 Resolution 2.15 Å

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		115	.	.	.	.	120	.	.	.	.	.	.								.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.				.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.																																									.	.	.
Query SS confidence														.	.	.	.	.	.	.																																									.	.	.
Query Sequence		E	I	Y	Q	P	G	T	K	T	L	G	K	.	.	.	.	.	.	.	V	A	I	I	G	A	G	P	A	G	L	Q	A	S	V	T	L	T	N	Q	G	Y	D	V	T	I	Y	E	K	E	A	H	P	G	G	W	L	R	N	G	.	.	.	I	P	Q	F	R	L	P	Q	S	V	L	D	A	E	I	A	R	I
Query Conservation														.	.	.	.	.	.	.																																									.	.	.
Alig confidence														.	.	.	.	.	.	.																																									.	.	.
Template Conservation
Template Sequence		V	L	D	P	S	E	D	P	A	Y	Y	D	H	V	H	V	H	T	D	V	L	V	V	G	A	G	P	A	G	L	A	A	A	R	E	A	S	R	S	G	A	R	V	M	L	L	D	E	R	P	E	A	G	G	T	L	R	E	A	S	G	E	Q	I	D	G	I	D	A	A	Q	W	I	D	A	V	T	E	E	L
Template Known Secondary structure					S	S																					S													T	T								S	S	S	S	S		G	G	G	G	G			S				T	T
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		185	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.																									.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure					.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence					.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		E	K	M	.	G	V	T	I	K	C	N	N	E	V	G	N	T	L	T	L	E	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	E	N	R	A	V	L	V	T	V	G	.	L	S	S	G	S	G	L	P	L	F	E	H	S	D	V	E	I	A	V	D
Query Conservation					.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence					.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		A	A	A	E	E	T	T	H	L	Q	R	T	T	V	F	G	S	Y	D	A	N	Y	I	L	A	A	Q	R	R	T	V	H	L	D	G	P	S	G	Q	G	V	S	R	E	R	I	W	H	I	R	A	K	Q	V	V	L	A	T	A	A	H	E	R	P	I	V	F	E	N	N	D	R	P	G	I	M	L	A	G	S
Template Known Secondary structure					T	T					S	S								T	T	T									S	T	T		S	S				T	T			S																									B	T	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	Q	R	A	R	Q	A	Q	G	D	I	S	I	P	Q	S	A	L	I	I	G	G	G	D	V	A	M	D	V	A	S	T	L	K	V	L	G	C	Q	A	V	T	C	V	A	R	E	E	L	D	E	F	P	A	S	E	K	E	F	T	S	A	R	E	L	G	V	S	I	I	D	G	F	T	P	V	A	V	E
Query Conservation
Alig confidence										.	.																																						.	.	.	.	.	.
Template Conservation										.	.																																						.	.	.	.	.	.
Template Sequence		V	R	S	Y	L	N	R	F	.	.	G	V	R	A	G	S	K	I	A	V	A	T	T	N	D	S	V	Y	P	L	V	S	E	L	A	A	S	G	G	V	V	A	V	I	D	A	R	.	.	.	.	.	.	Q	N	I	S	A	A	A	A	Q	A	V	T	D	G	V	T	V	L	T	G	S	V	V	A	N	T	E
Template Known Secondary structure										.	.				S		S	S						S	S	G	G	G								G	G	G	T			S						S	.	.	.	.	.	.	S	S											T	T					T	T
Template Predicted Secondary structure										.	.																																						.	.	.	.	.	.
Template SS confidence
		271	.	.	.	.	.	.	.			.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.							.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		319	320	.	.	.	.	.	.	.	.	.											330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.				.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.																																							.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.																																							.	.	.
Query Sequence		G	N	K	V	T	F	K	H	V	R	L	.	.	.	.	.	.	.	.	.	.	S	G	E	L	T	M	A	A	D	K	I	I	L	A	V	G	Q	H	A	R	L	D	A	F	A	E	L	E	P	Q	R	N	T	I	K	T	Q	N	.	.	.	Y	Q	T	R	D	P	Q	V	F	A	A	G	D	I	V	E	G	D
Query Conservation													.	.	.	.	.	.	.	.	.	.																																							.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.																																							.	.	.																.
Template Conservation																																																																															.
Template Sequence		A	D	A	S	G	E	L	S	A	V	L	V	A	T	L	D	E	Q	R	N	L	G	E	A	Q	R	F	E	A	D	V	L	A	V	S	G	G	F	N	P	V	V	H	L	H	S	Q	R	Q	G	K	L	N	W	D	T	S	I	H	A	F	V	P	A	D	A	V	A	N	Q	H	L	A	G	A	L	T	.	G	L
Template Known Secondary structure				T	T	S	S									B		T	T			B									S																		T	T							T	T	T	T						S			T	T					G	G	G	G	.	T
Template Predicted Secondary structure																																																																															.
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.		420	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	V	V	Y	A	V	K	T	G	K	E	A	A	E	A	I	H	H	Y	L	E	G	A	C	S	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	T	A	S	A	L	S	T	G	A	A	T	G	A	A	A	A	S	A	A	G	F	E	K	I	A
Template Known Secondary structure			S																			T	T
Template Predicted Secondary structure
Template SS confidence
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions