Job Description P76440 Confidence 95.64% Date Thu Jan 5 12:23:00 GMT 2012 Rank 464 Aligned Residues 142 % Identity 20% Template c1pzfD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:lactate dehydrogenase; PDBTitle: t.gondii ldh1 ternary complex with apad+ and oxalate Resolution 2.20 Å

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		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		Q	P	G	T	K	T	L	G	K	V	A	I	I	G	A	G	P	A	G	L	Q	A	S	V	T	L	T	N	Q	G	.	Y	D	V	T	I	Y	E	K	E	A	H	P	G	G	W	L	R	N	G	I	P	Q	F	R	L	P	Q	S	V	L	D	A	E	I	A	R	I	E	K	M	G	V	T	I	K	C	N	N	E
Query Conservation																																.
Alig confidence																																.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	A	L	V	Q	R	R	K	K	V	A	M	I	G	S	G	M	I	G	G	T	M	G	Y	L	C	A	L	R	E	L	A	D	V	V	L	Y	D	V	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	P	E	G	K	A	L	D	L	S	H	V	T	S	V	V	D	T	N	V	S
Template Known Secondary structure						S									S		S														T									S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.																		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		V	G	N	T	L	T	L	E	Q	L	K	A	E	N	R	A	V	L	V	T	V	G	L	S	S	G	S	G	L	P	L	F	E	H	S	D	V	E	I	A	V	D	F	L	Q	R	A	R	Q	A	Q	G	D	I	S	.	.	I	P	Q	S	A	L	I	I	G	G	G	D	V	A	M	D	V	A	S	T	L	K	V
Query Conservation																																																									.	.
Alig confidence																																																									.	.
Template Conservation
Template Sequence		V	R	A	E	Y	S	Y	E	A	A	L	T	G	A	D	C	V	I	V	T	A	G	L	T	K	V	P	G	K	P	D	S	E	W	S	R	N	D	L	L	P	F	N	S	K	I	I	R	E	I	G	Q	N	I	K	K	Y	C	P	K	T	F	I	I	V	V	T	N	P	L	D	C	M	V	K	V	M	C	E	A
Template Known Secondary structure							S						T	T		S							S		S	S		T	T			G	G	G			S	G	G	G																				T	T	S							S	S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		275	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		153	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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