Job Description P76330 Confidence 16.53% Date Thu Jan 5 12:21:53 GMT 2012 Rank 89 Aligned Residues 61 % Identity 30% Template d1t94a2 SCOP info DNA/RNA polymerases DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), catalytic domain Resolution 2.40

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		454	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	L	S	H	A	A	G	L	I	S	S	S	L	R	A	Q	D	V	A	G	R	V	G	G	E	E	F	C	V	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.
Template Sequence		A	V	S	K	E	V	K	E	I	L	A	D	Y	D	P	N	.	.	.	F	M	A	M	S	L	D	E	A	Y	L	N	I	T	K	H	L	E	E	R	Q	N	W	P	E	D	K	R	R	Y	F	I	K	M	V	E	N	D	N	P	G	K	E	V	N	K	L	S	E	H	E	R	S	I	S	P	L	L	F	N	P
Template Known Secondary structure																T	T	.	.	.					S	S	S														T	T			G	G	G	S														G	G	G	G	G	G	S	T	T	T	T	T	T	G	G	G
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
							486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	P	G	A	S	L	T	E	A	A	E	V	A	E	R	I	R	L	K	L	N	E	K	E	M	L	I	A	K	S	T	T	I	R	I	S	A	S	L	G	V	S
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.
Template Sequence		Q	I	L	Q	N	S	V	V	F	G	T	S	A	Q	E	V	V	K	E	I	R	F	R	I	E	Q	K	T	T	L	.	.	.	.	.	.	.	.	.	T	A	S	A	G	I	A
Template Known Secondary structure												S	S																	S		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.										.	.	310	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions