Job Description P76330 Confidence 97.57% Date Thu Jan 5 12:21:53 GMT 2012 Rank 20 Aligned Residues 256 % Identity 11% Template c3licA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of the extracellular domain of the putative2 histidine kinase sohk1s-z6 Resolution 2.30 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	V	V	L	E	D	A	Y	I	S	S	Q	R	N	H	L	E	N	V	A	N	A	L	D	K	H	L	Q	Y	N	V	D	K	L	I	F	L	R	N	G	M	R	E	A	L	V	A	P	L	D	F	T	S	L	R	D	A	V	T	E	F	E	Q	H	R	D	E	H	A	W	K	I	E	L	N	R	R	R	T
Query Conservation
Alig confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	Y	L	S	I	E	K	R	L	Y	E	N	L	A	Q	E	S	S	H	S	A	S	R	L	Q	F	L	L	E	H	A	Q	A	N	T	Q	G	L	S	D	F	I	G	L	L	A	D	K	D	D	I	N	N	P	E	K	L	K	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																																																	T	T	T	T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	V	N	G	V	S	D	A	L	V	S	E	G	N	L	L	S	R	E	N	E	S	L	D	N	E	I	T	A	A	L	E	V	G	Y	L	L	R	L	A	H	N	S	S	S	M	V	E	Q	A	M	Y	V	S	R	A	G	F	Y	V	S	T	Q	P	T	L	F	T	R	N	V	P	T	R	Y	Y	G	Y	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	N	R	I	Q	R	N	P	D	F	F	G	S	A	I	A	F	K	P	N	T	F	P	N	K	K	L	F	S	P	Y	V	Y	R	S	G	S	G	F	N	Y	L	D	.	.	.	.	.	I	G	A	D	G	Y	D	Y	T	D	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T										T	T	S	S	T	T		S		B								S	S	S						.	.	.	.	.					T			T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.
Template SS confidence
																						96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.						140	.	.	.	.	.	.	.	.	.	150
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	P	W	F	I	G	H	S	Q	R	E	N	R	H	R	A	V	R	W	F	T	S	Q	P	E	H	A	S	N	T	E	P	Q	V	T	V	S	V	P	V	D	S	N	N	Y	W	Y	G	V	L	G	M	S	I	P	V	R	T	M	Q	Q	F	L	R	N	A	I	D	K	N	L	D	G	E	Y	Q	L	Y	D
Query Conservation
Alig confidence												.	.	.	.																																																				.	.	.	.	.
Template Conservation												.	.	.	.																																																				.	.	.	.	.
Template Sequence		N	W	D	W	W	S	K	A	I	N	.	.	.	.	Q	V	G	G	Y	W	S	K	A	Y	F	D	E	G	A	G	N	V	L	X	I	T	Y	A	V	P	F	G	V	Q	P	D	Y	F	G	V	T	T	V	D	L	A	L	D	R	L	P	E	Q	L	G	.	.	.	.	.	I	A	P	S	R	L	V	V	L	D
Template Known Secondary structure		S						T	T	T	T	.	.	.	.	T	S	S										T	T	T	T		S										S		T	T												G	G	G						T	.	.	.	.	.	S		G	G	G
Template Predicted Secondary structure												.	.	.	.																																																				.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160					.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.						.	.	.	.	.	.	.	.	220	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320								.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.
Query Sequence		S	K	L	R	F	L	T	S	S	N	P	D	H	P	T	G	N	I	F	D	P	R	E	L	A	L	L	A	Q	A	M	E	H	D	T	R	G	.	.	.	.	.	.	.	G	I	R	M	D	S	R	Y	V	S	W	E	R	L	D	H	F	D	G	V	L	V	R	V	H	T	L	S	E	G	V	R	G
Query Conservation																																							.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	Q	G	R	L	I	F	H	S	D	K	E	K	V	L	A	G	W	L	D	K	Q	N	I	K	N	I	A	F	A	T	L	L	N	D	G	Q	A	G	Q	A	S	F	V	D	D	K	G	T	V	Y	L	A	S	V	A	E	V	A	K	L	K	W	R	V	V	V	X	V	P	K	H	E	L	F	A	S
Template Known Secondary structure		T	T	S						S	S					T				S		T	T	S	G	G	G										T										T	T												T	T	T
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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