Job Description P76330 Confidence 98.00% Date Thu Jan 5 12:21:53 GMT 2012 Rank 17 Aligned Residues 252 % Identity 12% Template c3liaA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:hypothetical sensory transduction histidine kinase; PDBTitle: crystal structure of the extracellular domain of the putative2 histidine kinase mmhk1s-z2 Resolution 1.99 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	Q	R	N	H	L	E	N	V	A	N	A	L	D	K	H	L	Q	Y	N	V	D	K	L	I	F	L	R	N	G	M	R	E	A	L	V	A	P	L	D	F	T	S	L	R	D	A	V	T	E	F	E	Q	H	R	D	E	H	A	W	K	I	E	L	N	R	R	R	T	L	P	V	N	G	V	S	D	A	L
Query Conservation
Alig confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	A	Y	E	K	S	I	E	M	A	G	N	Y	A	N	Q	F	D	A	Q	M	E	A	N	Q	A	I	A	R	T	L	A	C	T	M	A	E	Y	G	S	Q	D	R	E	E	A	M	S	I	I	K	R	I	L	N	E	N	P	Q	L	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																																										S																		T	T		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	E	G	N	L	L	S	R	E	N	E	S	L	D	N	E	I	T	A	A	L	E	V	G	Y	L	L	R	L	A	H	N	S	S	S	M	V	E	Q	A	M	Y	V	S	R	A	G	F	Y	V	S	T	Q	P	T	L	F	T	R	N	V	P	T	R	Y	Y	G	Y	V	T	Q	P	W	F	I	G	H	S	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Y	L	G	Y	E	P	D	A	F	D	G	R	D	K	N	Y	I	N	A	P	G	H	D	S	T	G	R	F	V	P	Y	C	N	K	I	N	G	P	V	I	I	E	P	L	V	H	Y	D	S	S	D	Y	Y	Q	L	P	K	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T	T	T	S		G	G	G		T	T		T	T			T	T										T	T	S	S									T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																							104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	N	R	H	R	A	V	R	W	F	T	S	Q	P	E	H	A	S	N	T	E	P	Q	V	T	V	S	V	P	V	D	S	N	N	Y	W	Y	G	V	L	G	M	S	I	P	V	R	T	M	Q	Q	F	L	R	N	A	I	D	K	N	L	D	G	E	Y	Q	L	Y	D	S	K	L	R	F	L	T	S	S	N
Query Conservation
Alig confidence		.	.	.	.													.	.	.																																											.
Template Conservation		.	.	.	.													.	.	.																																											.
Template Sequence		.	.	.	.	T	G	K	D	T	L	T	E	P	Y	F	Y	.	.	.	E	G	I	F	M	V	S	Y	D	S	P	I	F	K	N	G	E	F	A	G	I	A	G	V	D	V	P	L	E	Y	V	D	D	V	A	S	S	I	R	T	F	D	.	T	G	Y	A	F	M	V	S	N	T	G	I	F	L	S	H	P	T
Template Known Secondary structure		.	.	.	.			S										.	.	.	T	T													T	T																				T	T			B	T	T	.	T	B							T	T		B	B	S			S	S
Template Predicted Secondary structure		.	.	.	.													.	.	.																																											.
Template SS confidence
						163	.	.	.	.	.	.	170	.	.	.	.				.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.											.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.
Query Sequence		P	D	H	P	T	G	N	I	F	D	P	R	E	L	A	L	L	A	Q	A	M	E	H	D	T	R	G	G	.	.	.	.	.	.	.	.	.	.	I	R	M	D	S	R	Y	V	S	W	E	R	L	D	H	F	D	G	V	L	V	R	V	H	T	L	S	E	G	V
Query Conservation																														.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	K	N	W	I	G	E	K	S	L	S	D	F	D	V	E	E	I	K	N	A	A	S	D	I	R	E	G	I	G	G	H	V	E	I	K	D	P	I	T	G	K	T	V	I	M	F	Y	E	P	V	K	T	G	D	F	S	F	V	L	V	V	P	K	E	E	M	L
Template Known Secondary structure			G	G	G	T	T	T		B	G	G	G	S	S													T	T										T	T	T	T											T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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