Job Description P76330 Confidence 100.00% Date Thu Jan 5 12:21:53 GMT 2012 Rank 2 Aligned Residues 177 % Identity 31% Template c3ezuA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ggdef domain protein; PDBTitle: crystal structure of multidomain protein of unknown function with2 ggdef-domain (np_951600.1) from geobacter sulfurreducens at 1.95 a3 resolution Resolution 1.95 Å

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		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	I	S	W	Y	V	I	R	R	M	V	S	N	M	Y	V	L	Q	S	S	L	Q	W	Q	A	W	H	D	T	L	T	R	L	Y	N	R	G	A	L	F	E	K	A	R	P	L	A	K	L	C	Q	T	H	Q	H	P	F	S	V	I	Q	V	D	L	D	H	F	K	A	I	N	D	R	F	G	H	Q	A	G
Query Conservation
Alig confidence																																																																												.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.
Template Sequence		A	T	A	E	T	E	L	L	G	E	A	L	F	R	L	W	N	E	A	R	Q	L	A	A	Q	S	H	F	D	A	L	T	G	V	X	T	R	A	G	F	F	K	T	V	G	S	L	A	Y	A	A	Q	R	S	G	S	N	V	G	I	X	L	I	D	L	D	Y	F	K	L	V	G	Q	T	.	.	.	.	.	G
Template Known Secondary structure																													B		T	T	T		S	B																				T																				.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.						230
		453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.				.	.	.
Predicted Secondary structure																																																																												.	.	.
Query SS confidence																																																																												.	.	.
Query Sequence		D	R	V	L	S	H	A	A	G	L	I	S	S	S	L	R	A	Q	D	V	A	G	R	V	G	G	E	E	F	C	V	I	L	P	G	A	S	L	T	E	A	A	E	V	A	E	R	I	R	L	K	L	N	E	K	E	M	L	I	A	K	S	T	T	I	R	I	S	A	S	L	G	V	S	.	.	.	S	S	E
Query Conservation																																																																												.	.	.
Alig confidence																																																									.	.	.	.	.															.	.	.
Template Conservation																																																									.	.	.	.	.
Template Sequence		D	R	I	L	Q	L	V	A	E	T	I	T	S	H	L	R	R	S	D	V	V	G	R	Y	D	G	D	E	F	V	V	Y	L	S	P	V	E	P	A	S	L	R	T	V	A	E	N	L	R	R	S	I	E	E	E	.	.	.	.	.	S	A	R	X	V	P	V	T	A	S	I	G	V	A	Q	G	I	L	G	T
Template Known Secondary structure															T			T	T							S	S	S							S	S																					.	.	.	.	.	T	T	T	T																S
Template Predicted Secondary structure																																																									.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290						.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	G	D	Y	D	F	E	Q	L	Q	S	L	A	D	R	R	L	Y	L	A	K	Q	A	G	R	N	R	V	F	A
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		D	V	D	G	.	G	I	E	E	L	V	R	L	A	D	E	C	L	X	Q	A	K	Y	T	G	K	N	K	V	V	V
Template Known Secondary structure						.																			S		S	S	S
Template Predicted Secondary structure						.
Template SS confidence
		311	.	.	.		.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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